RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SMOC1Q9H4F8 434 aa15.69■□□□□ 0.1
RAB40B-202ENST00000538809 MARK1Q9P0L2 795 aa15.69■□□□□ 0.1
RAB40B-202ENST00000538809 MARCH2Q9P0N8 246 aa15.69■□□□□ 0.1
RAB40B-202ENST00000538809 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.69■□□□□ 0.1
RAB40B-202ENST00000538809 NYNRINQ9P2P1 1898 aaKnown RBP15.69■□□□□ 0.1
RAB40B-202ENST00000538809 GON4LQ3T8J9 2241 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 MUC22E2RYF6 1773 aaPredicted RBP15.68■□□□□ 0.1
RAB40B-202ENST00000538809 A0A0A0MRY4 1105 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 SLC12A8A0AV02 714 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 PRR5-ARHGAP8B1AHC4 643 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 GDF9O60383 454 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 FGFR1OPO95684 399 aaKnown RBP15.68■□□□□ 0.1
RAB40B-202ENST00000538809 PAEPP09466 180 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 SETSIPP0DME0 302 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 LCP1P13796 627 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 BCKDHBP21953 392 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 WASP42768 502 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 ZNF132P52740 706 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 ARHGAP8P85298 464 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 SF3A2Q15428 464 aaKnown RBP15.68■□□□□ 0.1
RAB40B-202ENST00000538809 EOGTQ5NDL2 527 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 EGFLAMQ63HQ2 1017 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 PM20D1Q6GTS8 502 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 LCLAT1Q6UWP7 414 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 SIX6OS1Q8N1H7 587 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 HMGB4Q8WW32 186 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 EDEM1Q92611 657 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 ERLEC1Q96DZ1 483 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 KREMEN1Q96MU8 473 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
RAB40B-202ENST00000538809 WDR35Q9P2L0 1181 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 HCN2Q9UL51 889 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 STRIP2Q9ULQ0 834 aa15.68■□□□□ 0.1
RAB40B-202ENST00000538809 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.68■□□□□ 0.1
RAB40B-202ENST00000538809 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 TCRBV21S2A2A0A5A6 115 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 MED19A0JLT2 244 aaPredicted RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 YJEFN3A6XGL0 299 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 E7ENQ6 273 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 COG7P83436 770 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 ELF2Q15723 593 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 DPCR1Q3MIW9 517 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 PREPLQ4J6C6 727 aaPredicted RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 CREBRFQ8IUR6 639 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 DENND1CQ8IV53 801 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 RLN3Q8WXF3 142 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 LOXL4Q96JB6 756 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 ZC3H10Q96K80 434 aaKnown RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 NUP62CLQ9H1M0 184 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 POLMQ9NP87 494 aaPredicted RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 AGO1Q9UL18 857 aaKnown RBP15.67■□□□□ 0.1
RAB40B-202ENST00000538809 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 CNTN6Q9UQ52 1028 aa15.67■□□□□ 0.1
RAB40B-202ENST00000538809 LAMA1P25391 3075 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 PRRT4C9JH25 899 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 MSI1O43347 362 aaKnown RBP15.66■□□□□ 0.1
RAB40B-202ENST00000538809 GABBR2O75899 941 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 ALDH1A2O94788 518 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 KRT5P13647 590 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 HOXB2P14652 356 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 MPLP40238 635 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 DGKGP49619 791 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 ATXN1P54253 815 aaKnown RBP15.66■□□□□ 0.1
RAB40B-202ENST00000538809 DAOAP59103 153 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 USP39Q53GS9 565 aaKnown RBP15.66■□□□□ 0.1
RAB40B-202ENST00000538809 PMF1Q6P1K2 205 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 FMNL3Q8IVF7 1028 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 CLEC4CQ8WTT0 213 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 KCTD13Q8WZ19 329 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 ACOX2Q99424 681 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 CRACR2AQ9BSW2 395 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 DCLK3Q9C098 648 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 SFMBT1Q9UHJ3 866 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 ZNF510Q9Y2H8 683 aa15.66■□□□□ 0.1
RAB40B-202ENST00000538809 DCDC2BA2VCK2 349 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 RHOBTB1O94844 696 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 CISD3P0C7P0 127 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 CREB5Q02930 508 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 CNGA2Q16280 664 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 AASDHQ4L235 1098 aaPredicted RBP15.65■□□□□ 0.1
RAB40B-202ENST00000538809 FYB2Q5VWT5 728 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 BSPRYQ5W0U4 402 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 PMS2CLQ68D20 193 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 TCEAL6Q6IPX3 200 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 GJB7Q6PEY0 223 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 NUDT18Q6ZVK8 323 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 TRMT11Q7Z4G4 463 aaKnown RBP15.65■□□□□ 0.1
RAB40B-202ENST00000538809 SCML4Q8N228 414 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 PGBD3Q8N328 593 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 FRMD1Q8N878 549 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 C12orf50Q8NA57 414 aaPredicted RBP15.65■□□□□ 0.1
RAB40B-202ENST00000538809 OLIG1Q8TAK6 271 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 NETO1Q8TDF5 533 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 RNF139Q8WU17 664 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 SLC35F5Q8WV83 523 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 TCEAL3Q969E4 200 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 PLD4Q96BZ4 506 aa15.65■□□□□ 0.1
RAB40B-202ENST00000538809 CNGB3Q9NQW8 809 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms