RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 CEP76Q8TAP6 659 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 SEMA4DQ92854 862 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 P2RY11Q96G91 374 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 HEXIM2Q96MH2 286 aaKnown RBP17.57■□□□□ 0.4
PTPN6-210ENST00000538318 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 SCAND2PQ9GZW5 306 aaPredicted RBP17.57■□□□□ 0.4
PTPN6-210ENST00000538318 GOLPH3LQ9H4A5 285 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 PLK2Q9NYY3 685 aa17.57■□□□□ 0.4
PTPN6-210ENST00000538318 CFAP47Q6ZTR5 3102 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 ZNF202O95125 648 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 PENKP01210 267 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-210ENST00000538318 ZNF33AQ06730 810 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 DUOXA1Q1HG43 343 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 DEFB119Q8N690 84 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 SLC4A11Q8NBS3 891 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 FBXL13Q8NEE6 735 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 TMEM176AQ96HP8 235 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 FAM124BQ9H5Z6 455 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-210ENST00000538318 CISHQ9NSE2 258 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 RAB20Q9NX57 234 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 SLC6A14Q9UN76 642 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 SLC27A6Q9Y2P4 619 aa17.56■□□□□ 0.4
PTPN6-210ENST00000538318 ADAMTS9Q9P2N4 1935 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 CFIP05156 583 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 SERPINF2P08697 491 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 CHKAP35790 457 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 MAPK8P45983 427 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 MXI1P50539 228 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 RAD23BP54727 409 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
PTPN6-210ENST00000538318 RAB41Q5JT25 222 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 FYB2Q5VWT5 728 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 ARHGAP17Q68EM7 881 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 RABEPKQ7Z6M1 372 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 DEFB124Q8NES8 71 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 BHMTQ93088 406 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 MRGPRX1Q96LB2 322 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 CAPN10Q9HC96 672 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 CACNA2D2Q9NY47 1150 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 CYP8B1Q9UNU6 501 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 RAD54BQ9Y620 910 aa17.55■□□□□ 0.4
PTPN6-210ENST00000538318 PCDH15Q96QU1 1955 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 WASH3PC4AMC7 463 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 STX10O60499 249 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 PROS1P07225 676 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 EFEMP1Q12805 493 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 FOXC1Q12948 553 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 PIGZQ86VD9 579 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 ARHGAP18Q8N392 663 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 ERLEC1Q96DZ1 483 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 EEF2KMTQ96G04 330 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 ARID3AQ99856 593 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 DCLK3Q9C098 648 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
PTPN6-210ENST00000538318 CACNA1EQ15878 2313 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 CHD6Q8TD26 2715 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 CETN3O15182 167 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
PTPN6-210ENST00000538318 CORO1AP31146 461 aaKnown RBP17.53■□□□□ 0.4
PTPN6-210ENST00000538318 MFAP3P55082 362 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 SEMA3BQ13214 749 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 ENPP2Q13822 863 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 PIP4P1Q86T03 277 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-210ENST00000538318 TRIML1Q8N9V2 468 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 ANKRD52Q8NB46 1076 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 TATDN2Q93075 761 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 ZNF419Q96HQ0 510 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-210ENST00000538318 HSPA12BQ96MM6 686 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 SLC6A17Q9H1V8 727 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 SLC32A1Q9H598 525 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 FSCN3Q9NQT6 498 aa17.53■□□□□ 0.4
PTPN6-210ENST00000538318 AGO1Q9UL18 857 aaKnown RBP17.53■□□□□ 0.4
PTPN6-210ENST00000538318 C1QTNF9BB2RNN3 333 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 NPC1O15118 1278 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 HMBSP08397 361 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 C1QTNF9P0C862 333 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 ZNF132P52740 706 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 ATXN3P54252 364 aaPredicted RBP17.52■□□□□ 0.4
PTPN6-210ENST00000538318 SLC8A3P57103 927 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 PM20D1Q6GTS8 502 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 UNQ6494/PRO21346Q6UXR6 183 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 METTL3Q86U44 580 aaKnown RBP17.52■□□□□ 0.4
PTPN6-210ENST00000538318 DENND1CQ8IV53 801 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 CPXM2Q8N436 756 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 CCDC34Q96HJ3 373 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 PIWIL1Q96J94 861 aaKnown RBP17.52■□□□□ 0.4
PTPN6-210ENST00000538318 CD93Q9NPY3 652 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 MARCH2Q9P0N8 246 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 THAP10Q9P2Z0 257 aaPredicted RBP17.52■□□□□ 0.4
PTPN6-210ENST00000538318 COQ4Q9Y3A0 265 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 STON1Q9Y6Q2 735 aa17.52■□□□□ 0.4
PTPN6-210ENST00000538318 ARHGAP33O14559 1287 aa17.51■□□□□ 0.39
PTPN6-210ENST00000538318 NDUFS2O75306 463 aa17.51■□□□□ 0.39
PTPN6-210ENST00000538318 TOP3BO95985 862 aaKnown RBP17.51■□□□□ 0.39
PTPN6-210ENST00000538318 ZBED1O96006 694 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms