RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 WDR4P57081 412 aaKnown RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 NCBP2-AS2Q69YL0 99 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 RPAINQ86UA6 219 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 IGDCC3Q8IVU1 814 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 MCUQ8NE86 351 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 CCDC110Q8TBZ0 833 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 DCAKDQ8WVC6 231 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 TRIB2Q92519 343 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 WNT8BQ93098 351 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 SLC2A13Q96QE2 648 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 NPY6RQ99463 290 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 PLCD4Q9BRC7 762 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 CRTAC1Q9NQ79 661 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 BEST1O76090 585 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 GOT1P17174 413 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 RPL9P32969 192 aaKnown RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 TKTL1P51854 596 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 MAP3K7CLP57077 242 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 NKX3-2P78367 333 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 MGAT3Q09327 533 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 SLC10A2Q12908 348 aaPredicted RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 ZKSCAN8Q15776 578 aaPredicted RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 SYCP2LQ5T4T6 812 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 FAXCQ5TGI0 409 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 OTUD1Q5VV17 481 aaPredicted RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 KIAA0319Q5VV43 1072 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 SPATA21Q7Z572 469 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 FAM35AQ86V20 835 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 NDRG1Q92597 394 aaKnown RBP16.23■□□□□ 0.19
MKS1-204ENST00000537529 LPPQ93052 612 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 NT5C3BQ969T7 300 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 GRAMD1AQ96CP6 724 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 ETNK1Q9HBU6 452 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 PNPLA8Q9NP80 782 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 IKBKGQ9Y6K9 419 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 A0A1W2PPM1 405 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TCRBV9S1A1TA0A576 114 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 ARL5CA6NH57 179 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 SEPT4O43236 478 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 CA12O43570 354 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TYROBPO43914 113 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 ZWINTO95229 277 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 APRTP07741 180 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TPSB2P20231 275 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TAC1P20366 129 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 AMPD1P23109 780 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 RAB27AP51159 221 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 CLCNKBP51801 687 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TPSAB1Q15661 275 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
MKS1-204ENST00000537529 BNIPLQ7Z465 357 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 MRPL10Q7Z7H8 261 aaKnown RBP16.22■□□□□ 0.19
MKS1-204ENST00000537529 PYROXD2Q8N2H3 581 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 TFB1MQ8WVM0 346 aaKnown RBP16.22■□□□□ 0.19
MKS1-204ENST00000537529 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
MKS1-204ENST00000537529 LRRC39Q96DD0 335 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 CFAP36Q96G28 342 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 POPDC2Q9HBU9 364 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 DTLQ9NZJ0 730 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 CDH9Q9ULB4 789 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 PTCH2Q9Y6C5 1203 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 SCN10AQ9Y5Y9 1956 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 IQANK1A0A1B0GTG1 560 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
MKS1-204ENST00000537529 M0QYT0 321 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 AP1G2O75843 785 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 DGKIO75912 1065 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 KRT4P19013 534 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 FOXN2P32314 431 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 SCNN1GP51170 649 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 DEUP1Q05D60 604 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 HHATQ5VTY9 493 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 AGMOQ6ZNB7 445 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 OLFM3Q96PB7 478 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 MAGEB5Q9BZ81 275 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 ARHGEF4Q9NR80 690 aa16.22■□□□□ 0.19
MKS1-204ENST00000537529 SF3B1O75533 1304 aaKnown RBP eCLIP16.21■□□□□ 0.198e-6■■■■■ 107
MKS1-204ENST00000537529 AVILO75366 819 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.19
MKS1-204ENST00000537529 INHBAP08476 426 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 GSTA2P09210 222 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
MKS1-204ENST00000537529 PCSK1P29120 753 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.19
MKS1-204ENST00000537529 NDUFV1P49821 464 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 SF3A3Q12874 501 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■■■■ 34.6
MKS1-204ENST00000537529 MTFR1Q15390 333 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 RGS9BPQ6ZS82 235 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 TRPM8Q7Z2W7 1104 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 CAND1Q86VP6 1230 aaKnown RBP16.21■□□□□ 0.19
MKS1-204ENST00000537529 MZB1Q8WU39 189 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 SLC44A1Q8WWI5 657 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 FERMT1Q9BQL6 677 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 ULBP1Q9BZM6 244 aa16.21■□□□□ 0.19
MKS1-204ENST00000537529 MIOSQ9NXC5 875 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms