RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RAB20Q9NX57 234 aa8.89□□□□□ -0.99
USP28-203ENST00000537490 CACNA2D2Q9NY47 1150 aa8.89□□□□□ -0.99
USP28-203ENST00000537490 CLIC5Q9NZA1 410 aa8.89□□□□□ -0.99
USP28-203ENST00000537490 RASAL2Q9UJF2 1139 aa8.89□□□□□ -0.99
USP28-203ENST00000537490 THADAQ6YHU6 1953 aa8.89□□□□□ -0.99
USP28-203ENST00000537490 MAP1BP46821 2468 aaKnown RBP8.89□□□□□ -0.99
USP28-203ENST00000537490 TULP2O00295 520 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 CETN3O15182 167 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 AP5Z1O43299 807 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 PENKP01210 267 aaPredicted RBP8.88□□□□□ -0.99
USP28-203ENST00000537490 CEACAM1P13688 526 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 SPINK2P20155 84 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 PRCPP42785 496 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 MXI1P50539 228 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 COG7P83436 770 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 ZNF33AQ06730 810 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 EFEMP1Q12805 493 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 FOXC1Q12948 553 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 PNOCQ13519 176 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 GEN1Q17RS7 908 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 EDRF1Q3B7T1 1238 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 RAB41Q5JT25 222 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 FYB2Q5VWT5 728 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 ARHGAP17Q68EM7 881 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 SLC36A4Q6YBV0 504 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 TADA2BQ86TJ2 420 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 FBXL13Q8NEE6 735 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 NDRG1Q92597 394 aaKnown RBP8.88□□□□□ -0.99
USP28-203ENST00000537490 FAXDC2Q96IV6 333 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 MRGPRX1Q96LB2 322 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 UBXN6Q9BZV1 441 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 SCAND2PQ9GZW5 306 aaPredicted RBP8.88□□□□□ -0.99
USP28-203ENST00000537490 CLEC4EQ9ULY5 219 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 SLC6A14Q9UN76 642 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 CYP8B1Q9UNU6 501 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 ZNF510Q9Y2H8 683 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 STON1Q9Y6Q2 735 aa8.88□□□□□ -0.99
USP28-203ENST00000537490 NUP205Q92621 2012 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 SLC12A8A0AV02 714 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 C1QTNF9BB2RNN3 333 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 GFRA2O00451 464 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 ZNF217O75362 1048 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CFIP05156 583 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 EPB41P11171 864 aaKnown RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 CORO1AP31146 461 aaKnown RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 DPP6P42658 865 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 PMS1P54277 932 aaKnown RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 MFAP3P55082 362 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 YWHAGP61981 247 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP28-203ENST00000537490 DUOXA1Q1HG43 343 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CBWD6Q4V339 395 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CBWD3Q5JTY5 395 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CBWD5Q5RIA9 395 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 PM20D1Q6GTS8 502 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 BHLHA9Q7RTU4 235 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 DENND1CQ8IV53 801 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 TRIML1Q8N9V2 468 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 ANKRD52Q8NB46 1076 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 OR2I1PQ8NGU4 316 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 ZNF419Q96HQ0 510 aaPredicted RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 CDK5RAP1Q96SZ6 601 aaKnown RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 ULBP1Q9BZM6 244 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 DCLK3Q9C098 648 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 DNAI2Q9GZS0 605 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CAPN10Q9HC96 672 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 MARCH2Q9P0N8 246 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 THAP10Q9P2Z0 257 aaPredicted RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 AGO1Q9UL18 857 aaKnown RBP8.87□□□□□ -0.99
USP28-203ENST00000537490 SLC27A6Q9Y2P4 619 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 COQ4Q9Y3A0 265 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 CHD8Q9HCK8 2581 aa8.87□□□□□ -0.99
USP28-203ENST00000537490 STX10O60499 249 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 PROS1P07225 676 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 SERPINF2P08697 491 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 MAOBP27338 520 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 HOXD12P35452 270 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 CHKAP35790 457 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 IL12RB1P42701 662 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 TKTL1P51854 596 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 ATXN3P54252 364 aaPredicted RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 GFPT1Q06210 699 aaPredicted RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 PDE4CQ08493 712 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 LRMPQ12912 555 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 SEMA3BQ13214 749 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 ENPP2Q13822 863 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 FUT11Q495W5 492 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 DCAF17Q5H9S7 520 aaPredicted RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 TCERG1LQ5VWI1 586 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 ANKRD40Q6AI12 368 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 KIAA1324Q6UXG2 1013 aaKnown RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 RSRC2Q7L4I2 434 aaKnown RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 PIP4P1Q86T03 277 aa8.86□□□□□ -0.99
USP28-203ENST00000537490 ZC3H3Q8IXZ2 948 aaKnown RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 FMR1NBQ8N0W7 255 aaPredicted RBP8.86□□□□□ -0.99
USP28-203ENST00000537490 ARHGAP18Q8N392 663 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms