RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 EXOC3L4Q17RC7 722 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 C2orf27AQ580R0 203 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GAS2L3Q86XJ1 694 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SCML4Q8N228 414 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CCDC26Q8TAB7 109 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ACDQ96AP0 544 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HHIPQ96QV1 700 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CNGB3Q9NQW8 809 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ARHGEF4Q9NR80 690 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 MARK1Q9P0L2 795 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 MARCH2Q9P0N8 246 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CCDC163A0A0D9SF12 145 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LGALS16A8MUM7 142 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 KRT5P13647 590 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LCP1P13796 627 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CNR2P34972 360 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GRIA2P42262 883 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DAOAP59103 153 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 BTBD8Q5XKL5 378 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TPGS1Q6ZTW0 290 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SIX6OS1Q8N1H7 587 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CAMKK1Q8N5S9 505 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 P2RY11Q96G91 374 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HINFPQ9BQA5 517 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 APEX2Q9UBZ4 518 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 NUP205Q92621 2012 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DNAH14Q0VDD8 3507 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 THADAQ6YHU6 1953 aa18.7■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PIK3R2O00459 728 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TRIM24O15164 1050 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HMBSP08397 361 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PON1P27169 355 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 KIR2DL1P43626 348 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FANCCQ00597 558 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 UBXN1Q04323 297 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 LPAL2Q16609 132 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 EMC10Q5UCC4 262 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 BSPRYQ5W0U4 402 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ENOSF1Q7L5Y1 443 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 BBS2Q9BXC9 721 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ACP6Q9NPH0 428 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SLC12A8A0AV02 714 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 NEDD8-MDP1E9PL57 170 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CACNG3O60359 315 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TYRP14679 529 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GPD2P43304 727 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MFAP3P55082 362 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MRPS21P82921 87 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SIM2Q14190 667 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TERB1Q8NA31 727 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CLEC4CQ8WTT0 213 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 EDEM1Q92611 657 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HSFY1Q96LI6 401 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SIX2Q9NPC8 291 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 OLA1Q9NTK5 396 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DEC1Q9P2X7 70 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 NCDNQ9UBB6 729 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 MMP17Q9ULZ9 603 aa18.69■□□□□ 0.58
TNFRSF1A-209ENST00000536717 GON4LQ3T8J9 2241 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PLXND1Q9Y4D7 1925 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CORO1AP31146 461 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TIE1P35590 1138 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TNFRSF4P43489 277 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RPL34P49207 117 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 UBASH3AP57075 661 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ARHGAP44Q17R89 818 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 CCDC33Q8N5R6 958 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 IL17RCQ8NAC3 791 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SHC3Q92529 594 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FAM81BQ96LP2 452 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DCLK3Q9C098 648 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ZDHHC4Q9NPG8 344 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 RTN4Q9NQC3 1192 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ABCC13Q9NSE7 274 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 SFMBT1Q9UHJ3 866 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 AJAP1Q9UKB5 411 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 AGO1Q9UL18 857 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 STRIP2Q9ULQ0 834 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 ZNF510Q9Y2H8 683 aa18.68■□□□□ 0.58
TNFRSF1A-209ENST00000536717 A0A1B0GTH6 734 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TMEM92Q6UXU6 159 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DENND1CQ8IV53 801 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 FMNL3Q8IVF7 1028 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 KIAA2013Q8IYS2 634 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 IRGQQ8WZA9 623 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 BHMTQ93088 406 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 XPO6Q96QU8 1125 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 DNAJC17Q9NVM6 304 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 PLK2Q9NYY3 685 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 WDR35Q9P2L0 1181 aa18.67■□□□□ 0.58
TNFRSF1A-209ENST00000536717 EBF1Q9UH73 591 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms