RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 BRAFP15056 766 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 ZKSCAN1P17029 563 aaPredicted RBP4.33□□□□□ -1.72
LINC02398-201ENST00000536666 TFEBP19484 476 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 ACVR2AP27037 513 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 TNFRSF8P28908 595 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 HOXA7P31268 230 aaPredicted RBP4.33□□□□□ -1.72
LINC02398-201ENST00000536666 POLD2P49005 469 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 SUMO3P55854 103 aaPredicted RBP4.33□□□□□ -1.72
LINC02398-201ENST00000536666 P2RX3P56373 397 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 CNGA3Q16281 694 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 MZT2AQ6P582 158 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 MICU3Q86XE3 530 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 RFX6Q8HWS3 928 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 IQCF1Q8N6M8 205 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 TRIM43Q96BQ3 446 aaPredicted RBP4.33□□□□□ -1.72
LINC02398-201ENST00000536666 MED30Q96HR3 178 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 LMLNQ96KR4 655 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 PCDH12Q9NPG4 1184 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 DNAJB11Q9UBS4 358 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 IPO11Q9UI26 975 aaKnown RBP4.33□□□□□ -1.72
LINC02398-201ENST00000536666 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
LINC02398-201ENST00000536666 TTC34A8MYJ7 566 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 PLA2G2AP14555 144 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 ST6GAL1P15907 406 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 YY1P25490 414 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 RBL1P28749 1068 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 NTSR1P30989 418 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 MLH1P40692 756 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 AGFG1P52594 562 aaKnown RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 NFATC4Q14934 902 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 CLCA4Q14CN2 919 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 B3GNT9Q6UX72 402 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 NPNTQ6UXI9 565 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 MAEAQ7L5Y9 396 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 TFAP2DQ7Z6R9 452 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 NR2C2APQ86WQ0 139 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 SPATA2LQ8IUW3 424 aaPredicted RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 FSTL5Q8N475 847 aaPredicted RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 SLC35G2Q8TBE7 412 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 NUDCD2Q8WVJ2 157 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 AIFM3Q96NN9 605 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 AGO4Q9HCK5 861 aaKnown RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 DDX56Q9NY93 547 aaKnown RBP4.32□□□□□ -1.72
LINC02398-201ENST00000536666 CPNE7Q9UBL6 633 aa4.32□□□□□ -1.72
LINC02398-201ENST00000536666 TRBV5-3A0A0A0MS03 114 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 A0A1W2PPC1 479 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 CAPN8A6NHC0 703 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 SPTLC2O15270 562 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 FGF3P11487 239 aaPredicted RBP4.31□□□□□ -1.72
LINC02398-201ENST00000536666 VPS41P49754 854 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 ENTPD1P49961 510 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 DLGAP5Q15398 846 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 C9orf50Q5SZB4 431 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 ZBTB34Q8NCN2 500 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 IPCEF1Q8WWN9 437 aaPredicted RBP4.31□□□□□ -1.72
LINC02398-201ENST00000536666 DNASE2BQ8WZ79 361 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 KAT2BQ92831 832 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 NEUROG1Q92886 237 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 MIB2Q96AX9 1013 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 HTATIP2Q9BUP3 242 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 B3GNT5Q9BYG0 378 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 ATP6V0A4Q9HBG4 840 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 MOV10Q9HCE1 1003 aaKnown RBP4.31□□□□□ -1.72
LINC02398-201ENST00000536666 MLXIPLQ9NP71 852 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 VPS45Q9NRW7 570 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 SEMA5BQ9P283 1151 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 AFF4Q9UHB7 1163 aaKnown RBP4.31□□□□□ -1.72
LINC02398-201ENST00000536666 ITGB1BP2Q9UKP3 347 aa4.31□□□□□ -1.72
LINC02398-201ENST00000536666 AGO2Q9UKV8 859 aaKnown RBP4.31□□□□□ -1.72
LINC02398-201ENST00000536666 USP19O94966 1318 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 ZNF335Q9H4Z2 1342 aaPredicted RBP4.3□□□□□ -1.72
LINC02398-201ENST00000536666 CFAP69A5D8W1 941 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 ISM1B1AKI9 464 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 HOXB2P14652 356 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 ARRB2P32121 409 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 DGKKQ5KSL6 1271 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
LINC02398-201ENST00000536666 NR4A3Q92570 626 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 LPAR1Q92633 364 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 NMD3Q96D46 503 aaKnown RBP4.3□□□□□ -1.72
LINC02398-201ENST00000536666 TAAR9Q96RI9 348 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 THSD1Q9NS62 852 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 MID2Q9UJV3 735 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 TPCN1Q9ULQ1 816 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 VPS4AQ9UN37 437 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 PCDHA7Q9UN72 937 aa4.3□□□□□ -1.72
LINC02398-201ENST00000536666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.29□□□□□ -1.72
LINC02398-201ENST00000536666 FAM227AF5H4B4 570 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 MYBP10242 640 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 RAE1P78406 368 aaKnown RBP4.29□□□□□ -1.72
LINC02398-201ENST00000536666 DNASE1L3Q13609 305 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 FHL3Q13643 280 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 C3orf38Q5JPI3 329 aa4.29□□□□□ -1.72
LINC02398-201ENST00000536666 GFI1BQ5VTD9 330 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms