RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TRIP4Q15650 581 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-206ENST00000536429 MEA1Q16626 185 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 EMC10Q5UCC4 262 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 HEATR6Q6AI08 1181 aaKnown RBP13.76□□□□□ -0.21
PRKDC-206ENST00000536429 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 ZBTB44Q8NCP5 570 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
PRKDC-206ENST00000536429 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PNKPQ96T60 521 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 ARHGEF4Q9NR80 690 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 ABCC13Q9NSE7 274 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-206ENST00000536429 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PLK2Q9NYY3 685 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 STRIP2Q9ULQ0 834 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 NAALADL1Q9UQQ1 740 aa13.76□□□□□ -0.21
PRKDC-206ENST00000536429 MYOFQ9NZM1 2061 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 SYCE3A1L190 88 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 CHURC1-FNTBB4DL54 471 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 F8VZ95 297 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 GFRA3O60609 400 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 KAT7O95251 611 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 PAPSS2O95340 614 aaPredicted RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 TYRP14679 529 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 CYP11B1P15538 503 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 EIF2DP41214 584 aaKnown RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 FNTBP49356 437 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 SRSF5Q13243 272 aaKnown RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 SYCP1Q15431 976 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 FBXO43Q4G163 708 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 C2orf27AQ580R0 203 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 TAF3Q5VWG9 929 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 MSANTD2Q6P1R3 559 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 ADAM32Q8TC27 787 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 DDX1Q92499 740 aaKnown RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 BBS2Q9BXC9 721 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 STK33Q9BYT3 514 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 OLA1Q9NTK5 396 aaKnown RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 MARK1Q9P0L2 795 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 HCN2Q9UL51 889 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 EP300Q09472 2414 aaPredicted RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
PRKDC-206ENST00000536429 ATG2BQ96BY7 2078 aa13.75□□□□□ -0.21
PRKDC-206ENST00000536429 LRRC10BA6NIK2 292 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 LILRB5O75023 590 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 ERBB2P04626 1255 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 APODP05090 189 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 GRIA2P42262 883 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 ACADSBP45954 432 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 PITX1P78337 314 aaPredicted RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 PTPN20Q4JDL3 420 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 SYPL2Q5VXT5 272 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 DQX1Q8TE96 717 aaKnown RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 NKD2Q969F2 451 aaPredicted RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 PLD4Q96BZ4 506 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 PPP1R13BQ96KQ4 1090 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 HHIPQ96QV1 700 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 BPIFA3Q9BQP9 254 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 CLEC4EQ9ULY5 219 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 HBS1LQ9Y450 684 aaKnown RBP13.74□□□□□ -0.21
PRKDC-206ENST00000536429 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
PRKDC-206ENST00000536429 A0A0A0MRY4 1105 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 TEX33O43247 280 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 CACNG3O60359 315 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 TSPAN3O60637 253 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 GFPT2O94808 682 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 PENKP01210 267 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-206ENST00000536429 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 TPM2P07951 284 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 CISD3P0C7P0 127 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 NCAM1P13591 858 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRKDC-206ENST00000536429 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
PRKDC-206ENST00000536429 KRT9P35527 623 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 TIE1P35590 1138 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-206ENST00000536429 JAM2P57087 298 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 UBXN1Q04323 297 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 IQCB1Q15051 598 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
PRKDC-206ENST00000536429 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
PRKDC-206ENST00000536429 TAC4Q86UU9 113 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms