RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PPARGC1AQ9UBK2 798 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 TMED5Q9Y3A6 229 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 H3BSA7 217 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 SMIM18P0DKX4 95 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 MYL2P10916 166 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 NAT1P18440 290 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ADCYAP1R1P41586 468 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 STT3AP46977 705 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 GRM2Q14416 872 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ZFYVE27Q5T4F4 411 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 FBXL19Q6PCT2 694 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ZPBP2Q6X784 338 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 BRSK2Q8IWQ3 736 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 TTC25Q96NG3 672 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 TSSK1BQ9BXA7 367 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 SAYSD1Q9NPB0 183 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 UVRAGQ9P2Y5 699 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 MEI4A8MW99 385 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 BTBD19C9JJ37 291 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 FBP2O00757 339 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 OGTO15294 1046 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 TCEA3O75764 348 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 TMEM191BP0C7N4 346 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 PMLP29590 882 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 RAP1GDS1P52306 607 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 EPHB1P54762 984 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 HADHBP55084 474 aaKnown RBP14.47□□□□□ -0.09
LIG1-203ENST00000536218 ATF7IP2Q5U623 682 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 THOC7Q6I9Y2 204 aaKnown RBP14.47□□□□□ -0.09
LIG1-203ENST00000536218 RHBDF2Q6PJF5 856 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 SLC2A7Q6PXP3 512 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 TMPRSS6Q8IU80 811 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 ICA1LQ8NDH6 482 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 RAB3IL1Q8TBN0 382 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 WNT8AQ9H1J5 351 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 AKT3Q9Y243 479 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 DICER1Q9UPY3 1922 aaKnown RBP14.47□□□□□ -0.09
LIG1-203ENST00000536218 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 VTNP04004 478 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 IQCF3P0C7M6 154 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 MAGEA4P43358 317 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 ARL4CP56559 192 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 MCCD1P59942 119 aaPredicted RBP14.47□□□□□ -0.09
LIG1-203ENST00000536218 ORC1Q13415 861 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 CCL15Q16663 113 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 UGT2A3Q6UWM9 527 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 PRPF18Q99633 342 aaKnown RBP14.47□□□□□ -0.09
LIG1-203ENST00000536218 TRAIPQ9BWF2 469 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 HEMGNQ9BXL5 484 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 IVNS1ABPQ9Y6Y0 642 aa14.47□□□□□ -0.09
LIG1-203ENST00000536218 PRPF4O43172 522 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■■■■□ 23.6
LIG1-203ENST00000536218 CXCL8P10145 99 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 CLCN2P51788 898 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 RELAQ04206 551 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 HNRNPDQ14103 355 aaKnown RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 DUOXA2Q1HG44 320 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 FAM172AQ8WUF8 416 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 OXNAD1Q96HP4 312 aaPredicted RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 EPB41L1Q9H4G0 881 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 MANSC1Q9H8J5 431 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 ADAMTS6Q9UKP5 1117 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 DMTF1Q9Y222 760 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 HBS1LQ9Y450 684 aaKnown RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 PAPPA2Q9BXP8 1791 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 A0A087WZ62 844 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 FAM237BA0A1B0GVD1 139 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 GLTPD2A6NH11 291 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 ASB14A6NK59 587 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 HBP1O60381 514 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 SERPINB7O75635 380 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 DPP9Q86TI2 863 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 POU5F2Q8N7G0 328 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 ZNF606Q8WXB4 792 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 USP6NLQ92738 828 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 CASP10Q92851 521 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 CNBD2Q96M20 576 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 FDXACB1Q9BRP7 624 aaPredicted RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 MAK16Q9BXY0 300 aaKnown RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 ARMC7Q9H6L4 198 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 S100A14Q9HCY8 104 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 TBCCD1Q9NVR7 557 aa14.46□□□□□ -0.09
LIG1-203ENST00000536218 MTO1Q9Y2Z2 717 aaKnown RBP14.46□□□□□ -0.09
LIG1-203ENST00000536218 CAPN8A6NHC0 703 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 SPECC1L-ADORA2AF8WAN1 911 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 MAGEC1O60732 1142 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 RABGAP1LQ5R372 815 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 ABRAQ8N0Z2 381 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 ZNF398Q8TD17 642 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 GFM2Q969S9 779 aaKnown RBP14.46□□□□□ -0.1
LIG1-203ENST00000536218 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 TRIM17Q9Y577 477 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 PCDHGB5Q9Y5G0 923 aa14.46□□□□□ -0.1
LIG1-203ENST00000536218 E9PBE3 544 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms