RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 VSTM4Q8IW00 320 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 CCDC105Q8IYK2 499 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 KIAA1958Q8N8K9 716 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
DDX55-204ENST00000536079 ATP2A3Q93084 1043 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 SYNCQ9H7C4 482 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 POPDC2Q9HBU9 364 aa18.67■□□□□ 0.58
DDX55-204ENST00000536079 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
DDX55-204ENST00000536079 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
DDX55-204ENST00000536079 NDRG2Q9UN36 371 aaKnown RBP18.67■□□□□ 0.58
DDX55-204ENST00000536079 ANTXRLA6NF34 631 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 FAM170BA6NMN3 283 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 SART1O43290 800 aaKnown RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 CBFA2T2O43439 604 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 IGLV3-25P01717 112 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 IGLV3-27P01718 113 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 PLEKP08567 350 aaPredicted RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 TFE3P19532 575 aaPredicted RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 CASP14P31944 242 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 MLLT6P55198 1093 aaPredicted RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 COG7P83436 770 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 CENPCQ03188 943 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 MESP2Q0VG99 397 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 UBXN2BQ14CS0 331 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 PON2Q15165 354 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 LY6G5CQ5SRR4 150 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 OTUD1Q5VV17 481 aaPredicted RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 SARM1Q6SZW1 724 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 ZNF852Q6ZMS4 543 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 TRIM72Q6ZMU5 477 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 BEND5Q7L4P6 421 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 SLC26A9Q7LBE3 791 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 DENND1CQ8IV53 801 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 CPA6Q8N4T0 437 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 PJA1Q8NG27 643 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 SHDQ96IW2 340 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 C11orf70Q9BRQ4 267 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 C8orf33Q9H7E9 229 aaPredicted RBP18.66■□□□□ 0.58
DDX55-204ENST00000536079 ASNSD1Q9NWL6 643 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 DLGAP2Q9P1A6 1054 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 STRIP2Q9ULQ0 834 aa18.66■□□□□ 0.58
DDX55-204ENST00000536079 GOLGA8SH3BPF8 625 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 DDX3XO00571 662 aaKnown RBP eCLIP18.65■□□□□ 0.584e-17■■■□□ 15.8
DDX55-204ENST00000536079 SLC9A3R1O14745 358 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 NFATC1O95644 943 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 AOC1P19801 751 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 AVPR2P30518 371 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 OPRD1P41143 372 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 SLC6A11P48066 632 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 GALK1P51570 392 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 CLCN5P51795 746 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 RNASE9P60153 205 aaKnown RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 ZBED6P86452 979 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 EIF4EBP2Q13542 120 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 DCAF6Q58WW2 860 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 EFHC1Q5JVL4 640 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 RALGPS2Q86X27 583 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 SFTPA1Q8IWL2 248 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 EZH1Q92800 747 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 FCRL2Q96LA5 508 aaPredicted RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 RBM12Q9NTZ6 932 aaKnown RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 TBC1D14Q9P2M4 693 aa18.65■□□□□ 0.58
DDX55-204ENST00000536079 LSM7Q9UK45 103 aaKnown RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 HBS1LQ9Y450 684 aaKnown RBP18.65■□□□□ 0.58
DDX55-204ENST00000536079 F5P12259 2224 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 TRDMT1O14717 391 aaKnown RBP18.64■□□□□ 0.57
DDX55-204ENST00000536079 HSF2BPO75031 334 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 DAB1O75553 588 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 TRUB2O95900 331 aaKnown RBP18.64■□□□□ 0.57
DDX55-204ENST00000536079 GLI1P08151 1106 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 TNFAIP3P21580 790 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 KLHL30Q0D2K2 578 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 FSTL4Q6MZW2 842 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 TPGS1Q6ZTW0 290 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 MON1BQ7L1V2 547 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 PHF13Q86YI8 300 aaPredicted RBP18.64■□□□□ 0.57
DDX55-204ENST00000536079 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 SLC39A13Q96H72 371 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 SPHK2Q9NRA0 654 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 RAPGEFL1Q9UHV5 662 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 XPO7Q9UIA9 1087 aaKnown RBP18.64■□□□□ 0.57
DDX55-204ENST00000536079 TMEM59LQ9UK28 342 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 SIT1Q9Y3P8 196 aa18.64■□□□□ 0.57
DDX55-204ENST00000536079 GOLGA6L7A0A1B0GV03 622 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 TMCO5BA8MYB1 307 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 MAN2B1O00754 1011 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 CAPN9O14815 690 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 TRIM24O15164 1050 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 CCDC172P0C7W6 258 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 CHRNB1P11230 501 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 FLT3P36888 993 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 TBX4P57082 545 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 RAB6CQ53S08 254 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 FAM102AQ5T9C2 384 aaPredicted RBP18.63■□□□□ 0.57
DDX55-204ENST00000536079 NADSYN1Q6IA69 706 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 ACAD10Q6JQN1 1059 aa18.63■□□□□ 0.57
DDX55-204ENST00000536079 TOGARAM2Q6ZUX3 1019 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms