RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 CHPFQ8IZ52 775 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 BHMTQ93088 406 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 MARCH2Q9P0N8 246 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 KIAA1257Q9ULG3 409 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 BICDL2A1A5D9 508 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 KLKB1P03952 638 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 VDRP11473 427 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 WASP42768 502 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 PDE4CQ08493 712 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 EGFLAMQ63HQ2 1017 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 NT5C1BQ96P26 610 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 ULBP1Q9BZM6 244 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 PLK2Q9NYY3 685 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
CLSTN3-204ENST00000535313 TPRP12270 2363 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 SLC12A8A0AV02 714 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 KHNYNO15037 678 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 PMM2O15305 246 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 CYBBP04839 570 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 ADRB1P08588 477 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 CISD3P0C7P0 127 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 MAP7D1Q3KQU3 841 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 PM20D1Q6GTS8 502 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 TMEM270Q6UE05 265 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 TOGARAM2Q6ZUX3 1019 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 SIX6OS1Q8N1H7 587 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 UBA3Q8TBC4 463 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 NELFBQ8WX92 580 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 PIGKQ92643 395 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 EDEM2Q9BV94 578 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 HCN2Q9UL51 889 aa16.96■□□□□ 0.31
CLSTN3-204ENST00000535313 LAMA1P25391 3075 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 PRRT4C9JH25 899 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 TULP2O00295 520 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 O00370 1275 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 PENKP01210 267 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 PAEPP09466 180 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 SETSIPP0DME0 302 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 DENND1CQ8IV53 801 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 TMEFF1Q8IYR6 380 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 UBR7Q8N806 425 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 RNF139Q8WU17 664 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 ACOX2Q99424 681 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 CALCOCO1Q9P1Z2 691 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 MBD1Q9UIS9 605 aaPredicted RBP16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 FBXO10Q9UK96 956 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 PCDHB4Q9Y5E5 795 aa16.95■□□□□ 0.3
CLSTN3-204ENST00000535313 A0A1W2PQF6 199 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 GFRA2O00451 464 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 P4HA2O15460 535 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 GNA14O95837 355 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 GABRG2P18507 467 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 DPP6P42658 865 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 FYB2Q5VWT5 728 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 FOXR2Q6PJQ5 311 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 SLC36A4Q6YBV0 504 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 ARMCX6Q7L4S7 300 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 FRMD1Q8N878 549 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 KCTD13Q8WZ19 329 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 NDRG1Q92597 394 aaKnown RBP16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 GABRG3Q99928 467 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 CNGB3Q9NQW8 809 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 SLC27A6Q9Y2P4 619 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 NUP205Q92621 2012 aa16.94■□□□□ 0.3
CLSTN3-204ENST00000535313 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 ACACBO00763 2458 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 LNP1A1A4G5 178 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 BIN1O00499 593 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 TM4SF5O14894 197 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 AP5Z1O43299 807 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 ZNF217O75362 1048 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 BMP6P22004 513 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 MORC3Q14149 939 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 STILQ15468 1287 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 BSPRYQ5W0U4 402 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 LYSMD4Q5XG99 296 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 FMNL3Q8IVF7 1028 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 CPXM2Q8N436 756 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 DDI1Q8WTU0 396 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 UCMAQ8WVF2 138 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 LSM14BQ9BX40 385 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms