RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ANKRD63C9JTQ0 380 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 WNT10BO00744 389 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TP73O15350 636 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TTI1O43156 1089 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DAPK3O43293 454 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 AKAP8O43823 692 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 EXOC3O60645 756 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ATP9AO75110 1047 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RTN2O75298 545 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RAD17O75943 681 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FGGP02679 453 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NR1D1P20393 614 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SFNP31947 248 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GTF2H1P32780 548 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 LSP1P33241 339 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MDH1P40925 334 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 BCL6P41182 706 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 JAK3P52333 1124 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GNGT1P63211 74 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KCNAB2Q13303 367 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PDCLQ13371 301 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 BIRC3Q13489 604 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DHX34Q14147 1143 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RASA3Q14644 834 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PGM5Q15124 567 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PTGISQ16647 500 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CR1LQ2VPA4 569 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DNAJC21Q5F1R6 531 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PRAMEF18Q5VWM3 479 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF772Q68DY9 489 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MAATS1Q7Z4T9 603 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 YTHDF3Q7Z739 585 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DAAM2Q86T65 1068 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NOP9Q86U38 636 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CCDC26Q8TAB7 109 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PARD3BQ8TEW8 1205 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PSPC1Q8WXF1 523 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CTNNBL1Q8WYA6 563 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SEMA4DQ92854 862 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KAT5Q92993 513 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DVL3Q92997 716 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TMEM169Q96HH4 297 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 C12orf42Q96LP6 360 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TAAR1Q96RJ0 339 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 IWS1Q96ST2 819 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PDCD2LQ9BRP1 358 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CELF4Q9BZC1 486 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FAM129AQ9BZQ8 928 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 EPN3Q9H201 632 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TMEM8AQ9HCN3 771 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PXMP2Q9NR77 195 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 AMACRQ9UHK6 382 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RSPH14Q9UHP6 348 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF112Q9UJU3 913 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GTF3C4Q9UKN8 822 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PNMA2Q9UL42 364 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 STYXL1Q9Y6J8 313 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 LRRC37A2A6NM11 1700 aa6.3□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NFASCO94856 1347 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 A0A087WUV0 522 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PHF2O75151 1096 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SGPL1O95470 568 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PIGRP01833 764 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FTLP02792 175 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KRT13P13646 458 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KCNA2P16389 499 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF28P17035 718 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 YWHABP31946 246 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CHRNA3P32297 505 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CTNNA1P35221 906 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NPTX2P47972 431 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GCLMP48507 274 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MARCKSL1P49006 195 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FNTAP49354 379 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MXI1P50539 228 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DNA2P51530 1060 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PSMC5P62195 406 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GPC5P78333 572 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CDR2Q01850 454 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CXCL9Q07325 125 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PRPF4BQ13523 1007 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MTMR1Q13613 665 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SURF1Q15526 300 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CEP85LQ5SZL2 805 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TTC27Q6P3X3 843 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ANO5Q75V66 913 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MIGA2Q7L4E1 593 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CBWD2Q8IUF1 395 aa6.29□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms