RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SRGAP2BP0DMP2 458 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 PAFAH1B1P43034 410 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.35
SCARB1-204ENST00000535005 TAF10Q12962 218 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 FAM102AQ5T9C2 384 aaPredicted RBP12.83□□□□□ -0.35
SCARB1-204ENST00000535005 PHLDB2Q86SQ0 1253 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 IFT20Q8IY31 132 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 ZNF276Q8N554 614 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 LEMD2Q8NC56 503 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 NDRG1Q92597 394 aaKnown RBP12.83□□□□□ -0.35
SCARB1-204ENST00000535005 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 SFXN1Q9H9B4 322 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 IL21Q9HBE4 155 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 CLIC5Q9NZA1 410 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 CTTNBP2NLQ9P2B4 639 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 CCL16O15467 120 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 LTFP02788 710 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 F11P03951 625 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 FYNP06241 537 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 MYBL2P10244 700 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 PTPN2P17706 415 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 RFC1P35251 1148 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 FNTAP49354 379 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 TAF5Q15542 800 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 TMC8Q8IU68 726 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 SPATA4Q8NEY3 305 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 EPN3Q9H201 632 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 ACTR5Q9H9F9 607 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 NMUR1Q9HB89 426 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF334Q9HCZ1 680 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 TLR8Q9NR97 1041 aaKnown RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 METTL5Q9NRN9 209 aaKnown RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 ABCC13Q9NSE7 274 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 GMIPQ9P107 970 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 CHORDC1Q9UHD1 332 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-204ENST00000535005 COG5Q9UP83 839 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 DUSP10Q9Y6W6 482 aa12.83□□□□□ -0.36
SCARB1-204ENST00000535005 CCDC195A0A1B0GUA6 201 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 C2CD4BA6NLJ0 364 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 HMGB1P1B2RPK0 211 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 PDE2AO00408 941 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 CHUKO15111 745 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 LINC01565O15544 149 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 DAB1O75553 588 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 FGF19O95750 216 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 IGFBP4P22692 258 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 RPL7AP62424 266 aaKnown RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 IFRD2Q12894 506 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 DCUN1D2Q6PH85 259 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 HFE2Q6ZVN8 426 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 P3H4Q92791 437 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 FAM161BQ96MY7 647 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 DDX23Q9BUQ8 820 aaKnown RBP12.82□□□□□ -0.36
SCARB1-204ENST00000535005 DONSONQ9NYP3 566 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 SALL4Q9UJQ4 1053 aa12.82□□□□□ -0.36
SCARB1-204ENST00000535005 A0A1W2PQH9 124 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 GRID2IPA4D2P6 1211 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 DPYSL4O14531 572 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 SRGAP2O75044 1071 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 GJB6O95452 261 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 NOS2P35228 1153 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 FLT3P36888 993 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 MATKP42679 507 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 PGFP49763 221 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 C2orf54Q08AI8 447 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CCDC181Q5TID7 509 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 SYCE2Q6PIF2 218 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 TMEM150AQ86TG1 271 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 DEFB106AQ8N104 65 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 MAGEC3Q8TD91 643 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 PABPC5Q96DU9 382 aaKnown RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 MCEEQ96PE7 176 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CDX2Q99626 313 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 OSGEPQ9NPF4 335 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 ASAH2Q9NR71 780 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 RRN3Q9NYV6 651 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CLEC1BQ9P126 229 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms