RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 BBS2Q9BXC9 721 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 PCDHB4Q9Y5E5 795 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 A0A0C4DFX4 3053 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 TBC1D3BA6NDS4 549 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 IGLV3-27P01718 113 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 TYRP14679 529 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 SCNN1AP37088 669 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 LMAN2Q12907 356 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 MMRN2Q9H8L6 949 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 XIRP2A4UGR9 3374 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 IGLV3-19P01714 112 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 PKN3Q6P5Z2 889 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 GBP6Q6ZN66 633 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 RSRC2Q7L4I2 434 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 TMEM25Q86YD3 366 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 MED15Q96RN5 788 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 MIS12Q9H081 205 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 DNAJC17Q9NVM6 304 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 THAP10Q9P2Z0 257 aaPredicted RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 RASAL2Q9UJF2 1139 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 AP5Z1O43299 807 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ASLP04424 464 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 SLC6A11P48066 632 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ATXN1P54253 815 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ANO4Q32M45 955 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ANKS1BQ7Z6G8 1248 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 KBTBD6Q86V97 674 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 RBBP8NLQ8NC74 664 aaPredicted RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 ULBP1Q9BZM6 244 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 INTS2Q9H0H0 1204 aaKnown RBP10.87□□□□□ -0.67
CSDE1-217ENST00000534699 LHX5Q9H2C1 402 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 SUSD2Q9UGT4 822 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 CTNND2Q9UQB3 1225 aa10.87□□□□□ -0.67
CSDE1-217ENST00000534699 TRIM49BA6NDI0 452 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SLC2A3P11169 496 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 CD19P15391 556 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 MPLP40238 635 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SLC11A2P49281 568 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 ZBTB16Q05516 673 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SPEM2Q0P670 501 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 STARD3Q14849 445 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 FYB2Q5VWT5 728 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 ZDHHC17Q8IUH5 632 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 HHIPQ96QV1 700 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SRRTQ9BXP5 876 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SCML1Q9UN30 329 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 CORO1AP31146 461 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 SLC12A1Q13621 1099 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 ADGRF1Q5T601 910 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 TTC39BQ5VTQ0 682 aaPredicted RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 BSPRYQ5W0U4 402 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 HEATR6Q6AI08 1181 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 FOXJ1Q92949 421 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 EEF2KMTQ96G04 330 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 PIWIL1Q96J94 861 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 NOX5Q96PH1 765 aa10.86□□□□□ -0.67
CSDE1-217ENST00000534699 AGO1Q9UL18 857 aaKnown RBP10.86□□□□□ -0.67
CSDE1-217ENST00000534699 CKAP5Q14008 2032 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 SLC12A8A0AV02 714 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 TYW5A2RUC4 315 aaKnown RBP10.85□□□□□ -0.67
CSDE1-217ENST00000534699 KHNYNO15037 678 aaKnown RBP10.85□□□□□ -0.67
CSDE1-217ENST00000534699 LTFP02788 710 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 BMP6P22004 513 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 TMEM270Q6UE05 265 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 TMEM110Q86TL2 294 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 C12orf40Q86WS4 652 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 ALLCQ8N6M5 410 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CADM4Q8NFZ8 388 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 ZDHHC5Q9C0B5 715 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CD248Q9HCU0 757 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 SUN2Q9UH99 717 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 TLR6Q9Y2C9 796 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 NUP205Q92621 2012 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CXorf51AA0A1B0GTR3 108 aa10.85□□□□□ -0.67
CSDE1-217ENST00000534699 CAVIN2O95810 425 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms