RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 PCDHGB2Q9Y5G2 931 aa4.41□□□□□ -1.7
RCN1-211ENST00000533898 PLXNA3P51805 1871 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 RALGAPA2Q2PPJ7 1873 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 TSC2P49815 1807 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 C5orf67F2Z3F1 127 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 DDX3XO00571 662 aaKnown RBP eCLIP4.4□□□□□ -1.7
RCN1-211ENST00000533898 OGTO15294 1046 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 INPPL1O15357 1258 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 EFCAB14O75071 495 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 CALCAP01258 141 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 DLATP10515 647 aaKnown RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 GAP43P17677 238 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 SP100P23497 879 aaPredicted RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 TKTP29401 623 aaKnown RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 LTBRP36941 435 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 TAF5Q15542 800 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 ZBTB6Q15916 424 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 UPP1Q16831 310 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 BMT2Q1RMZ1 405 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 ANO4Q32M45 955 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 TMEM177Q53S58 311 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 XKR4Q5GH76 650 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 SPOPLQ6IQ16 392 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 ARMCX5Q6P1M9 558 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 SASS6Q6UVJ0 657 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 MCATQ8IVS2 390 aaKnown RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 SYCP3Q8IZU3 236 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 VPS52Q8N1B4 723 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 OR2C3Q8N628 320 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 TMEM169Q96HH4 297 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 ACCSQ96QU6 501 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 TCF25Q9BQ70 676 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 VPS11Q9H270 941 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 CUEDC2Q9H467 287 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 CLSTN2Q9H4D0 955 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 MMRN2Q9H8L6 949 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 GP6Q9HCN6 339 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 MRGBPQ9NV56 204 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 TMEM51Q9NW97 253 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 OXSMQ9NWU1 459 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 RBAKQ9NYW8 714 aaPredicted RBP4.4□□□□□ -1.7
RCN1-211ENST00000533898 POLG2Q9UHN1 485 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 CTNND2Q9UQB3 1225 aa4.4□□□□□ -1.7
RCN1-211ENST00000533898 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 WDFY3Q8IZQ1 3526 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 PVALEFA0A1B0GWK0 134 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 KINO60870 393 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 SOAT2O75908 522 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 SMNDC1O75940 238 aaKnown RBP eCLIP4.4□□□□□ -1.71
RCN1-211ENST00000533898 B3GAT3O94766 335 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 INMTO95050 263 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 VNN1O95497 513 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 VNN2O95498 520 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 CST3P01034 146 aaPredicted RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 NR3C1P04150 777 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 RPLP2P05387 115 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 TMEM253P0C7T8 217 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 EPCAMP16422 314 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 AXLP30530 894 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 CA8P35219 290 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 NRIP1P48552 1158 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 TFAMQ00059 246 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 CDC42EP1Q00587 391 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 PPP3CAQ08209 521 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 SNRNP35Q16560 246 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 KNOP1Q1ED39 458 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 DCAF4L1Q3SXM0 396 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 TIGD5Q53EQ6 642 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 AGAP9Q5VTM2 703 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 PRAMEF13Q5VWM6 474 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 CAVIN1Q6NZI2 390 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 EP400NLQ6ZTU2 488 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 CEP57Q86XR8 500 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 IRF2BP1Q8IU81 584 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 ADSSL1Q8N142 457 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 NUDT8Q8WV74 236 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 ZNF558Q96NG5 402 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 ACAP3Q96P50 834 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 RTP3Q9BQQ7 232 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 ADPGKQ9BRR6 497 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 PI4K2AQ9BTU6 479 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 UNKQ9C0B0 810 aaKnown RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 DMAC2Q9NW81 257 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 IFT80Q9P2H3 777 aaPredicted RBP4.4□□□□□ -1.71
RCN1-211ENST00000533898 SEL1LQ9UBV2 794 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 HMGXB4Q9UGU5 601 aa4.4□□□□□ -1.71
RCN1-211ENST00000533898 ZDBF2Q9HCK1 2354 aa4.39□□□□□ -1.71
RCN1-211ENST00000533898 DCHS1Q96JQ0 3298 aa4.39□□□□□ -1.71
RCN1-211ENST00000533898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.39□□□□□ -1.71
RCN1-211ENST00000533898 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
RCN1-211ENST00000533898 C2orf71A6NGG8 1288 aa4.39□□□□□ -1.71
RCN1-211ENST00000533898 LRRIQ3A6PVS8 624 aaPredicted RBP4.39□□□□□ -1.71
RCN1-211ENST00000533898 PODXLO00592 558 aa4.39□□□□□ -1.71
RCN1-211ENST00000533898 RGS13O14921 159 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms