RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 NUDT18Q6ZVK8 323 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 ZNF677Q86XU0 584 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 TMEM35BQ8NCS4 154 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
TSKU-204ENST00000533752 CLEC4CQ8WTT0 213 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 SERPINB11Q96P15 392 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 PNKPQ96T60 521 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 SYNCQ9H7C4 482 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 CYTH4Q9UIA0 394 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 CACNA1IQ9P0X4 2223 aa16.54■□□□□ 0.24
TSKU-204ENST00000533752 CAPN9O14815 690 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
TSKU-204ENST00000533752 APODP05090 189 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 GLI1P08151 1106 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 HMBSP08397 361 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 NCAM1P13591 858 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 CDH5P33151 784 aaPredicted RBP16.53■□□□□ 0.24
TSKU-204ENST00000533752 SOX5P35711 763 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 NBL1P41271 181 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 STAT1P42224 750 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 GRIA2P42262 883 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 KLK7P49862 253 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 JAM2P57087 298 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 CSTF1Q05048 431 aaKnown RBP16.53■□□□□ 0.24
TSKU-204ENST00000533752 RING1Q06587 406 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 MAML2Q8IZL2 1156 aaPredicted RBP16.53■□□□□ 0.24
TSKU-204ENST00000533752 EPS8L1Q8TE68 723 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 ACDQ96AP0 544 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
TSKU-204ENST00000533752 CPXM1Q96SM3 734 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 POPDC2Q9HBU9 364 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 ASNSD1Q9NWL6 643 aa16.53■□□□□ 0.24
TSKU-204ENST00000533752 CHURC1-FNTBB4DL54 471 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 NEDD8-MDP1E9PL57 170 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 CACNG3O60359 315 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 HSF2BPO75031 334 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 RNF40O75150 1001 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 KLKB1P03952 638 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 CYBBP04839 570 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 NRLP54845 237 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 YWHAZP63104 245 aaKnown RBP16.52■□□□□ 0.24
TSKU-204ENST00000533752 GAS6Q14393 721 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 IQCB1Q15051 598 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.24
TSKU-204ENST00000533752 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 ZDHHC17Q8IUH5 632 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 DENND1CQ8IV53 801 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 UNC45BQ8IWX7 931 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 CPXM2Q8N436 756 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 FBRSL1Q9HCM7 1045 aaKnown RBP16.52■□□□□ 0.24
TSKU-204ENST00000533752 NLRC4Q9NPP4 1024 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
TSKU-204ENST00000533752 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 FAM86C1Q9NVL1 165 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 DEC1Q9P2X7 70 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 SFMBT1Q9UHJ3 866 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
TSKU-204ENST00000533752 PCDHGA2Q9Y5H1 932 aa16.52■□□□□ 0.24
TSKU-204ENST00000533752 PROB1E7EW31 1015 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 EPHB6O15197 1021 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 MSI1O43347 362 aaKnown RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 GFPT2O94808 682 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 KAT7O95251 611 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 TYRP14679 529 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 SATB1Q01826 763 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 GRAMD4Q6IC98 578 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 TRIM72Q6ZMU5 477 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 CACNA2D4Q7Z3S7 1137 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 NOP9Q86U38 636 aaKnown RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 C12orf40Q86WS4 652 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 WDTC1Q8N5D0 677 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 DDX1Q92499 740 aaKnown RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 IRX2Q9BZI1 471 aaPredicted RBP16.51■□□□□ 0.23
TSKU-204ENST00000533752 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 ZSCAN32Q9NX65 697 aa16.51■□□□□ 0.23
TSKU-204ENST00000533752 TULP3O75386 442 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 SERPINC1P01008 464 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 IGLV3-27P01718 113 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 CCDC172P0C7W6 258 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 HOXA6P31267 233 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 SCNN1AP37088 669 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 TNFRSF4P43489 277 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 SLC11A2P49281 568 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 TBX4P57082 545 aa16.5■□□□□ 0.23
TSKU-204ENST00000533752 MRPS21P82921 87 aaKnown RBP16.5■□□□□ 0.23
TSKU-204ENST00000533752 CDR2Q01850 454 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms