RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 PITX1P78337 314 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 FCHO2Q0JRZ9 810 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 EFEMP1Q12805 493 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 OTUD1Q5VV17 481 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 ALKBH5Q6P6C2 394 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 C3orf20Q8ND61 904 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 NT5C3BQ969T7 300 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 ADAM33Q9BZ11 813 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 SMOC2Q9H3U7 446 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 MARCH2Q9P0N8 246 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 SFMBT1Q9UHJ3 866 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 MYO10Q9HD67 2058 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 ZNF263O14978 683 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 FLT3P36888 993 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 BNIPLQ7Z465 357 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 KIAA1958Q8N8K9 716 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 JOSD2Q8TAC2 188 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 BPIFB1Q8TDL5 484 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 RNF139Q8WU17 664 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 GOLGA1Q92805 767 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 UHRF1Q96T88 793 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 TRIM62Q9BVG3 475 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 STC2O76061 302 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 LCA5LO95447 670 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 IGLV3-27P01718 113 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 NOS2P35228 1153 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 MATKP42679 507 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 RSRC2Q7L4I2 434 aaKnown RBP13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 TAC4Q86UU9 113 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 MIB1Q86YT6 1006 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 DEPDC1BQ8WUY9 529 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 CCDC42Q96M95 316 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 NPY6RQ99463 290 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 NACA2Q9H009 215 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.28
RPUSD4-208ENST00000533628 SLC12A8A0AV02 714 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 ARNTLO00327 626 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 KLKB1P03952 638 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 PSMC3P17980 439 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 TFE3P19532 575 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 MAMLD1Q13495 774 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 TDGQ13569 410 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 GRM2Q14416 872 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 MTF1Q14872 753 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 Q6ZNB5 142 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 DDX42Q86XP3 938 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 ASIC4Q96FT7 647 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 SLC39A13Q96H72 371 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 HBS1LQ9Y450 684 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-208ENST00000533628 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 C2CD4BA6NLJ0 364 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 DPYSL4O14531 572 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 CAPN9O14815 690 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 ATMINO43313 823 aaPredicted RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 NARSO43776 548 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 AKR1B10O60218 316 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 TRUB2O95900 331 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 KRT3P12035 628 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 RFC1P35251 1148 aaPredicted RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 GALCP54803 685 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 RNASE9P60153 205 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 COG7P83436 770 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 NNTQ13423 1086 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 HTR3DQ70Z44 454 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 TMTC1Q8IUR5 882 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 CCDC170Q8IYT3 715 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 EMC1Q8N766 993 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 COL4A2P08572 1712 aa13.26□□□□□ -0.29
RPUSD4-208ENST00000533628 SOWAHDA6NJG2 315 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 CLGNO14967 610 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 IRAK2O43187 625 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 CYP1A2P05177 515 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 MYBL1P10243 752 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 GSDMDP57764 484 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 RPL7AP62424 266 aaKnown RBP13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 ZNF653Q96CK0 615 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 FCRL2Q96LA5 508 aaPredicted RBP13.25□□□□□ -0.29
RPUSD4-208ENST00000533628 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms