RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ZBED1O96006 694 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 ADH1CP00326 375 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 CASP14P31944 242 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 OPRD1P41143 372 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 TKTL1P51854 596 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZBED6P86452 979 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 MEA1Q16626 185 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 Q6ZS52 159 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 SLC20A1Q8WUM9 679 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 NAGPAQ9UK23 515 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 R4GN57 208 aa13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-212ENST00000533058 HELZP42694 1942 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 CCDC163A0A0D9SF12 145 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 FAM170AA1A519 330 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 K7ESF4 209 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 TULP2O00295 520 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 PIK3R2O00459 728 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 ADCY5O95622 1261 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 EGFP01133 1207 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 GYPCP04921 128 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 MMEP08473 750 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 LCP1P13796 627 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 CNR2P34972 360 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 COG7P83436 770 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 SATB1Q01826 763 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 GAD2Q05329 585 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 KLHL30Q0D2K2 578 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 TDRD12Q587J7 1177 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZNF677Q86XU0 584 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 SIX6OS1Q8N1H7 587 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 EPS8L1Q8TE68 723 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 SLC35F5Q8WV83 523 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 HSFY1Q96LI6 401 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 SYNCQ9H7C4 482 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC4-212ENST00000533058 FANCMQ8IYD8 2048 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 HOXC11O43248 304 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 ADH5P11766 374 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 RPL34P49207 117 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 CDR2Q01850 454 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 PREPLQ4J6C6 727 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 C10orf120Q5SQS8 335 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 LY6G5CQ5SRR4 150 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 Q6ZNB5 142 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 BBS7Q8IWZ6 715 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 CAMKK1Q8N5S9 505 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 TMEM35BQ8NCS4 154 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 EZH1Q92800 747 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 EPC1Q9H2F5 836 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 CNGB3Q9NQW8 809 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 SPHK2Q9NRA0 654 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 NOCTQ9UK39 431 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
TRAPPC4-212ENST00000533058 MYO15AQ9UKN7 3530 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 RNF40O75150 1001 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 SKILP12757 684 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 GPD2P43304 727 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ACADSBP45954 432 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ADKP55263 362 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 SNX16P57768 344 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ADIGQ0VDE8 80 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 HSF5Q4G112 596 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 PMF1Q6P1K2 205 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ETFBKMTQ8IXQ9 262 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 SPC24Q8NBT2 197 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 IRGQQ8WZA9 623 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 WBP2Q969T9 261 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ACDQ96AP0 544 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms