RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ENPEPQ07075 957 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 SLC36A4Q6YBV0 504 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 SLC41A1Q8IVJ1 513 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 ASPMQ8IZT6 3477 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 C1QTNF9BB2RNN3 333 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 C1QTNF9P0C862 333 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 PSEN1P49768 467 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 MXI1P50539 228 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF33AQ06730 810 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 EFEMP1Q12805 493 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 KRT39Q6A163 491 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 SDE2Q6IQ49 451 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 SLC4A11Q8NBS3 891 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 HEXIM2Q96MH2 286 aaKnown RBP17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 CISHQ9NSE2 258 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 CACNA1EQ15878 2313 aa17.95■□□□□ 0.46
RPUSD4-207ENST00000532800 RALAP11233 206 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 GTF2H1P32780 548 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 DPP6P42658 865 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 RAD23BP54727 409 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 DUOXA1Q1HG43 343 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 FYB2Q5VWT5 728 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 TADA2BQ86TJ2 420 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF276Q8N554 614 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 MRGPRX1Q96LB2 322 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 HSPA12BQ96MM6 686 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 GTPBP2Q9BX10 602 aaKnown RBP17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 CAPN10Q9HC96 672 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 CLIC5Q9NZA1 410 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 FBXO10Q9UK96 956 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 SLC6A14Q9UN76 642 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 AKAP13Q12802 2813 aa17.94■□□□□ 0.46
RPUSD4-207ENST00000532800 A0A1W2PQ27 194 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 A0A1W2PQ64 194 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 A0A1W2PQD8 194 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 ZBTB24O43167 697 aaPredicted RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF217O75362 1048 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF202O95125 648 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 PENKP01210 267 aaPredicted RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 PROS1P07225 676 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 CORO1AP31146 461 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 HOXD12P35452 270 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 MFAP3P55082 362 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 MCCD1P59942 119 aaPredicted RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 EDRF1Q3B7T1 1238 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 KIAA1324Q6UXG2 1013 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 UNQ6494/PRO21346Q6UXR6 183 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 PIGZQ86VD9 579 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 FBXL13Q8NEE6 735 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 OR2I1PQ8NGU4 316 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 TATDN2Q93075 761 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 TMEM176AQ96HP8 235 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 RAB20Q9NX57 234 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 STON1Q9Y6Q2 735 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 PCNX2A6NKB5 2137 aa17.93■□□□□ 0.46
RPUSD4-207ENST00000532800 CHD6Q8TD26 2715 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 TULP2O00295 520 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 SERPINF2P08697 491 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 ATXN3P54252 364 aaPredicted RBP17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 SEMA3BQ13214 749 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CBWD6Q4V339 395 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 RAB41Q5JT25 222 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CBWD3Q5JTY5 395 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CBWD5Q5RIA9 395 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CEP76Q8TAP6 659 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 NDRG1Q92597 394 aaKnown RBP17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CDK5RAP1Q96SZ6 601 aaKnown RBP17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 TMEM121BQ9BXQ6 578 aaPredicted RBP17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 ADAM33Q9BZ11 813 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 DNAI2Q9GZS0 605 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 AGO1Q9UL18 857 aaKnown RBP17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 CLEC4EQ9ULY5 219 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 SLC27A6Q9Y2P4 619 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 WDFY3Q8IZQ1 3526 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 IGF2RP11717 2491 aa17.92■□□□□ 0.46
RPUSD4-207ENST00000532800 ZZEF1O43149 2961 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 SPAARA0A1B0GVQ0 90 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 GFRA2O00451 464 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 EPB41P11171 864 aaKnown RBP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 IL12RB1P42701 662 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 YWHAGP61981 247 aaKnown RBP eCLIP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 COG7P83436 770 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 GFPT1Q06210 699 aaPredicted RBP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 PNOCQ13519 176 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 FUT11Q495W5 492 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 DCAF17Q5H9S7 520 aaPredicted RBP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 ARHGAP17Q68EM7 881 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 RSRC2Q7L4I2 434 aaKnown RBP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 BHLHA9Q7RTU4 235 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 PIP4P1Q86T03 277 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 DENND1CQ8IV53 801 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 MINDY1Q8N5J2 469 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 FAXDC2Q96IV6 333 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 SCNM1Q9BWG6 230 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 ULBP1Q9BZM6 244 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms