RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 BMT2Q1RMZ1 405 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 FAM173BQ6P4H8 233 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 UNC13DQ70J99 1090 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 C12orf56Q8IXR9 622 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
CMTM1-215ENST00000531885 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 TAF4BQ92750 862 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 WBP2Q969T9 261 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 LRIG1Q96JA1 1093 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 SMOQ99835 787 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 CD248Q9HCU0 757 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 PNPLA8Q9NP80 782 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 ITM2CQ9NQX7 267 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 FAM49BQ9NUQ9 324 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 PLK2Q9NYY3 685 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 USP36Q9P275 1121 aaKnown RBP12.16□□□□□ -0.46
CMTM1-215ENST00000531885 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 HCN2Q9UL51 889 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 PCDHGB2Q9Y5G2 931 aa12.16□□□□□ -0.46
CMTM1-215ENST00000531885 APC2O95996 2303 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 WASH3PC4AMC7 463 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CYP26A1O43174 497 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CBFA2T3O75081 653 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 KIF20AO95235 890 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CAPNS1P04632 268 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 SYT1P21579 422 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CASP4P49662 377 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 TPMTP51580 245 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 NDST1P52848 882 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
CMTM1-215ENST00000531885 HLA-BQ31612 363 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 TMPRSS7Q7RTY8 843 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 ZNF396Q96N95 335 aaPredicted RBP12.15□□□□□ -0.46
CMTM1-215ENST00000531885 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CIPCQ9C0C6 399 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 PCED1AQ9H1Q7 454 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 CD93Q9NPY3 652 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
CMTM1-215ENST00000531885 THAP10Q9P2Z0 257 aaPredicted RBP12.15□□□□□ -0.46
CMTM1-215ENST00000531885 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 IGSF10Q6WRI0 2623 aa12.15□□□□□ -0.46
CMTM1-215ENST00000531885 A0A1W2PQH9 124 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 LRRIQ3A6PVS8 624 aaPredicted RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 SPTLC2O15270 562 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 TIMM44O43615 452 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 GREM1O60565 184 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 PPP6R2O75170 966 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 BEST1O76090 585 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 EPHX1P07099 455 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 CISD3P0C7P0 127 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 IL12RB1P42701 662 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 MFAP3P55082 362 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 SLC8A3P57103 927 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 ORC1Q13415 861 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 CUL4AQ13619 759 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 SOWAHCQ53LP3 525 aaPredicted RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 SLCO6A1Q86UG4 719 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 C12orf29Q8N999 325 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 ZMIZ2Q8NF64 920 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 PARD3BQ8TEW8 1205 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 CYFIP2Q96F07 1278 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 NT5C1AQ9BXI3 368 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 MKRN2Q9H000 416 aaKnown RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 SLC39A2Q9NP94 309 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 ELOVL2Q9NXB9 296 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 CLIC5Q9NZA1 410 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 EIF2B4Q9UI10 523 aaKnown RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 FBXO10Q9UK96 956 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
CMTM1-215ENST00000531885 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
CMTM1-215ENST00000531885 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
CMTM1-215ENST00000531885 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
CMTM1-215ENST00000531885 MDM4O15151 490 aa12.13□□□□□ -0.47
CMTM1-215ENST00000531885 STC2O76061 302 aa12.13□□□□□ -0.47
CMTM1-215ENST00000531885 C4BPAP04003 597 aaKnown RBP12.13□□□□□ -0.47
CMTM1-215ENST00000531885 CORO1AP31146 461 aaKnown RBP12.13□□□□□ -0.47
CMTM1-215ENST00000531885 GRK6P43250 576 aa12.13□□□□□ -0.47
CMTM1-215ENST00000531885 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
CMTM1-215ENST00000531885 CLDN10P78369 228 aa12.13□□□□□ -0.47
CMTM1-215ENST00000531885 E2F4Q16254 413 aa12.13□□□□□ -0.47
CMTM1-215ENST00000531885 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms