RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 GALNT4Q8N4A0 578 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 ST8SIA4Q92187 359 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 NPIPB3Q92617 1050 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 CENPIQ92674 756 aaPredicted RBP3.37□□□□□ -1.87
CD44-234ENST00000531873 HDAC2Q92769 488 aaKnown RBP3.37□□□□□ -1.87
CD44-234ENST00000531873 ZUFSPQ96AP4 578 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 CTHRC1Q96CG8 243 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 HVCN1Q96D96 273 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 ZBTB10Q96DT7 871 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 ADOQ96SZ5 270 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 BRD8Q9H0E9 1235 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 JMJD4Q9H9V9 463 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 PLEKHA2Q9HB19 425 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 TRIM36Q9NQ86 728 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 STEAP1Q9UHE8 339 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 NOX1Q9Y5S8 564 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 ITIH6Q6UXX5 1313 aa3.37□□□□□ -1.87
CD44-234ENST00000531873 A1L4Q6 167 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 UNC119BA6NIH7 251 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 A8MVJ9 347 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 MUSKO15146 869 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 PROM1O43490 865 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LARGE1O95461 756 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 ITGB3P05106 788 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 FESP07332 822 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 TMEM225BP0DP42 221 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 PEPDP12955 493 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 ALADP13716 330 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 DDX6P26196 483 aaKnown RBP eCLIP3.36□□□□□ -1.87
CD44-234ENST00000531873 THBS4P35443 961 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 BMPR1AP36894 532 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LIPAP38571 399 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 CCT4P50991 539 aaKnown RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 DCAF7P61962 342 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 SLC25A3Q00325 362 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 DEUP1Q05D60 604 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.36□□□□□ -1.87
CD44-234ENST00000531873 DCTN1Q14203 1278 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 R3HDM1Q15032 1099 aaKnown RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 ANKRD1Q15327 319 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 AAK1Q2M2I8 961 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 P3H1Q32P28 736 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 CTXN3Q4LDR2 81 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LRRC24Q50LG9 513 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 SYNE3Q6ZMZ3 975 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 GPR149Q86SP6 731 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 TTC30AQ86WT1 665 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LNX2Q8N448 690 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 TSPYL6Q8N831 410 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.36□□□□□ -1.87
CD44-234ENST00000531873 USP38Q8NB14 1042 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LINS1Q8NG48 757 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 TBC1D22AQ8WUA7 517 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 R3HDM4Q96D70 268 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 RSPRY1Q96DX4 576 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 PRR25Q96S07 402 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 MRIQ9BWK5 157 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 PHF7Q9BWX1 381 aaPredicted RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 SCAND2PQ9GZW5 306 aaPredicted RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 PAIP1Q9H074 479 aaKnown RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 PRDM13Q9H4Q3 707 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 CCDC134Q9H6E4 229 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 NRDE2Q9H7Z3 1164 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 RMI1Q9H9A7 625 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 NOD2Q9HC29 1040 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 GLOD4Q9HC38 313 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 PREBQ9HCU5 417 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 RXFP3Q9NSD7 469 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 LIN7CQ9NUP9 197 aaKnown RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 SMPD4Q9NXE4 827 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 CEP72Q9P209 647 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 NRBP1Q9UHY1 535 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 ASAP1Q9ULH1 1129 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 HSF4Q9ULV5 492 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 GABRQQ9UN88 632 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 UBE2J1Q9Y385 318 aaPredicted RBP3.36□□□□□ -1.87
CD44-234ENST00000531873 AFG3L2Q9Y4W6 797 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 ADGRA2Q96PE1 1338 aa3.36□□□□□ -1.87
CD44-234ENST00000531873 POLR2AP24928 1970 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 CCDC187A0A096LP49 1063 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 CCDC196A0A1B0GTZ2 297 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 WDR27A2RRH5 827 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 A6NCN8 305 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 MBD3L5A6NJ08 208 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 TMEM200CA6NKL6 621 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 CYR61O00622 381 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 KIAA0355O15063 1070 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 SLC16A3O15427 465 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 KLK10O43240 276 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 CA12O43570 354 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 PMPCBO75439 489 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 NDUFA10O95299 355 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 DDX58O95786 925 aaKnown RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 SLPIP03973 132 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 IL6RP08887 468 aaPredicted RBP3.35□□□□□ -1.87
CD44-234ENST00000531873 ACP5P13686 325 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 CD19P15391 556 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 ABCD3P28288 659 aa3.35□□□□□ -1.87
CD44-234ENST00000531873 GKP32189 559 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms