RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SLC4A7Q9Y6M7 1214 aa11.71□□□□□ -0.53
NXF1-211ENST00000531709 CNTNAP2Q9UHC6 1331 aa11.71□□□□□ -0.53
NXF1-211ENST00000531709 COL16A1Q07092 1604 aaPredicted RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 CHADO15335 359 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 GRIA1P42261 906 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 GLRBP48167 497 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 GBE1Q04446 702 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 PDK2Q15119 407 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 RAB6CQ53S08 254 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 METTL7BQ6UX53 244 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 UNC5BQ8IZJ1 945 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 TNS4Q8IZW8 715 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 PLD5Q8N7P1 536 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 CMTM5Q96DZ9 223 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 RAB6CQ9H0N0 254 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 CDT1Q9H211 546 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 NFASCO94856 1347 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 MAFO75444 373 aaPredicted RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 ERVK-10P10266 1014 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 RALBP11234 206 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 GTF2A2P52657 109 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 NOMO1Q15155 1222 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 RNF135Q8IUD6 432 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 KIAA0319LQ8IZA0 1049 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 PIWIL2Q8TC59 973 aaKnown RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 Q9H521 79 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 ZNF214Q9UL59 606 aaPredicted RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 LRRC42Q9Y546 428 aa11.71□□□□□ -0.54
NXF1-211ENST00000531709 MRPL42Q9Y6G3 142 aaKnown RBP11.71□□□□□ -0.54
NXF1-211ENST00000531709 LAMB2P55268 1798 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 TPP1O14773 563 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 GPC4O75487 556 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 SULT1E1P49888 294 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 NUDT2P50583 147 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 VWA5B1Q5TIE3 1220 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 CHST13Q8NET6 341 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 LGMNQ99538 433 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 RNPEPQ9H4A4 650 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 ADA2Q9NZK5 511 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 ETS2P15036 469 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 MSX2P35548 267 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 SLC25A11Q02978 314 aaKnown RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 BTKQ06187 659 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 CNGA3Q16281 694 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 MCUQ8NE86 351 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 FRMD8Q9BZ67 464 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 KLK14Q9P0G3 267 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 STX18Q9P2W9 335 aaKnown RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 POLBP06746 335 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 ZFXP17010 805 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 ASPAP45381 313 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 POU5F1BQ06416 359 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 PRKD1Q15139 912 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 PDPK2PQ6A1A2 396 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 PDZD4Q76G19 769 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 PNPOQ9NVS9 261 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 BTBD7Q9P203 1132 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 CPSF3Q9UKF6 684 aaKnown RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
NXF1-211ENST00000531709 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
NXF1-211ENST00000531709 GLRA3O75311 464 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 FARP2O94887 1054 aaPredicted RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 CSH1P0DML2 217 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CSH2P0DML3 217 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 ATXN1P54253 815 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 RWDD4Q6NW29 188 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 SLC4A11Q8NBS3 891 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 SERPINI1Q99574 410 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CYTH4Q9UIA0 394 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 AFG3L2Q9Y4W6 797 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 MSCO60682 206 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms