RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KCNK4Q9NYG8 393 aa5.82□□□□□ -1.48
PCF11-205ENST00000530906 CHORDC1Q9UHD1 332 aaPredicted RBP5.82□□□□□ -1.48
PCF11-205ENST00000530906 LGALS13Q9UHV8 139 aa5.82□□□□□ -1.48
PCF11-205ENST00000530906 ZHX1Q9UKY1 873 aaPredicted RBP5.82□□□□□ -1.48
PCF11-205ENST00000530906 PTPN22Q9Y2R2 807 aa5.82□□□□□ -1.48
PCF11-205ENST00000530906 MGAMO43451 1857 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 A0A087WUV0 522 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 GMNCA6NCL1 334 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 C3orf70A6NLC5 250 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 C2CD4BA6NLJ0 364 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 KIAA1324LA8MWY0 1029 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 DNALI1O14645 258 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 MCF2LO15068 1137 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 MDM4O15151 490 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 TRAPPC3O43617 180 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 GPR32O75388 356 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 LRCH4O75427 683 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SPAG6O75602 509 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ENDOD1O94919 500 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CELF2O95319 508 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 IGLV1-40P01703 118 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 IGHA2P01877 340 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 GJB1P08034 283 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CYP2C9P11712 490 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ZFXP17010 805 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 GPD1P21695 349 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 KDELR1P24390 212 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 PHBP35232 272 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 RFC1P35251 1148 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 PTPN9P43378 593 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 KCNJ1P48048 391 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 RPL34P49207 117 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 NDST1P52848 882 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ITGA8P53708 1063 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SLC18A1P54219 525 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 BCAT1P54687 386 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SLC8A3P57103 927 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 MAGOHP61326 146 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 OSTNP61366 133 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 NKX3-2P78367 333 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 SV2CQ496J9 727 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ZNF394Q53GI3 561 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ZFYVE27Q5T4F4 411 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 FAM102AQ5T9C2 384 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 IZUMO3Q5VZ72 239 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 MAP1SQ66K74 1059 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 KCTD16Q68DU8 428 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 MFSD7Q6UXD7 560 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ALKAL1Q6UXT8 129 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CENPUQ71F23 418 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ANKS1BQ7Z6G8 1248 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 TMEM110Q86TL2 294 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 RPAINQ86UA6 219 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 RSPH3Q86UC2 560 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 TAX1BP1Q86VP1 789 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 PPIL6Q8IXY8 311 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 TMEM192Q8IY95 271 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CRYBG2Q8N1P7 616 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SH2D3CQ8N5H7 860 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 HAUS1Q96CS2 278 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CPB2Q96IY4 423 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 FAM84AQ96KN4 292 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 HSFY1Q96LI6 401 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CPXM1Q96SM3 734 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 NSRP1Q9H0G5 558 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 SDCBP2Q9H190 292 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CDC42EP4Q9H3Q1 356 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 CENPHQ9H3R5 247 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SEMA4AQ9H3S1 761 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 PLEKHA4Q9H4M7 779 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SMYD3Q9H7B4 428 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ZNF408Q9H9D4 720 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 CHST12Q9NRB3 414 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 SLC38A7Q9NVC3 462 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 RCOR3Q9P2K3 495 aaPredicted RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 TPX2Q9ULW0 747 aaKnown RBP5.81□□□□□ -1.48
PCF11-205ENST00000530906 POLIQ9UNA4 740 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ZNF148Q9UQR1 794 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 USTQ9Y2C2 406 aa5.81□□□□□ -1.48
PCF11-205ENST00000530906 ARHGEF37A1IGU5 675 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 C17orf102A2RUQ5 167 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 C5orf60A6NFR6 353 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 E7EVH7 732 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 F8VP50 259 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 GOLGA8SH3BPF8 625 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 M0QZ92 97 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 PIRO00625 290 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 ALOX15BO15296 676 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 TP73O15350 636 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 GSC2O15499 205 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 MEFVO15553 781 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 DYNC1LI2O43237 492 aaPredicted RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 PRPSAP2O60256 369 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 CAND2O75155 1236 aa5.8□□□□□ -1.48
PCF11-205ENST00000530906 DUSP11O75319 330 aaKnown RBP5.8□□□□□ -1.48
PCF11-205ENST00000530906 KIAA0754O94854 1291 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms