RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 SGK1O00141 431 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 CSPG5O95196 566 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 INHBAP08476 426 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 ZNF26P17031 533 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 PRAMEP78395 509 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 NME3Q13232 169 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 GALNT18Q6P9A2 607 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 UTS2BQ765I0 119 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 GET4Q7L5D6 327 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 PTAR1Q7Z6K3 402 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 IGFN1Q86VF2 1251 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 FIBCD1Q8N539 461 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 MRPL46Q9H2W6 279 aaKnown RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 CXorf21Q9HAI6 301 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 DNM3Q9UQ16 869 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 DNAJC16Q9Y2G8 782 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 DCXO43602 365 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 ENO2P09104 434 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 CLK2P49760 499 aaKnown RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 THOP1P52888 689 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 PKNOX1P55347 436 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 PPP3CAQ08209 521 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 TRAF2Q12933 501 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 MOGQ16653 247 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 CLEC16AQ2KHT3 1053 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 ABCB5Q2M3G0 1257 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 SLC51AQ86UW1 340 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 REM2Q8IYK8 340 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 EFHD2Q96C19 240 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 KCNK16Q96T55 309 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 PLLPQ9Y342 182 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 ZNFX1Q9P2E3 1918 aaKnown RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 TOM1L1O75674 476 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 KLHL2O95198 593 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 CHRNB1P11230 501 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 SLC16A2P36021 539 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 HSPA13P48723 471 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 MS4A2Q01362 244 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 IFITM2Q01629 132 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 BFSP1Q12934 665 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 LDLRAP1Q5SW96 308 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 TTBK2Q6IQ55 1244 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 RNF19BQ6ZMZ0 732 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 BPHLQ86WA6 291 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 PDZD8Q8NEN9 1154 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 BHLHE22Q8NFJ8 381 aaPredicted RBP14.59□□□□□ -0.07
PCF11-204ENST00000530660 CAPSLQ8WWF8 208 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 COQ10BQ9H8M1 238 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 SIRPGQ9P1W8 387 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 SHOC2Q9UQ13 582 aa14.59□□□□□ -0.07
PCF11-204ENST00000530660 AIM2O14862 343 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 RNASEH2AO75792 299 aaKnown RBP14.58□□□□□ -0.07
PCF11-204ENST00000530660 MYO1DO94832 1006 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 TPTEP56180 551 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 WASHC5Q12768 1159 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 MYCT1Q8N699 235 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 KREMEN1Q96MU8 473 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 NAP1L4Q99733 375 aaKnown RBP14.58□□□□□ -0.07
PCF11-204ENST00000530660 JMJD4Q9H9V9 463 aa14.58□□□□□ -0.07
PCF11-204ENST00000530660 PIK3R2O00459 728 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 KRT75O95678 551 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 CYP11B1P15538 503 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 PTPN2P17706 415 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 BMPR2Q13873 1038 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 MGAT5BQ3V5L5 792 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 RFPL4BQ6ZWI9 263 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 EEPD1Q7L9B9 569 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 MAVSQ7Z434 540 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 C11orf74Q86VG3 221 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 NACC2Q96BF6 587 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 PCIF1Q9H4Z3 704 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 SAE1Q9UBE0 346 aaPredicted RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 FETUBQ9UGM5 382 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 hCG_1984214I3L0E3 225 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 SNNO75324 88 aaPredicted RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 TXNL4AP83876 142 aaKnown RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 SELENBP1Q13228 472 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 SLC15A2Q16348 729 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 CARTPTQ16568 116 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 CARM1Q86X55 608 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 ZC3H7AQ8IWR0 971 aaKnown RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 FAM47BQ8NA70 645 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 CPA5Q8WXQ8 436 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 USP13Q92995 863 aaPredicted RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 CMTM5Q96DZ9 223 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 FAR2Q96K12 515 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 CLK4Q9HAZ1 481 aaKnown RBP14.58□□□□□ -0.08
PCF11-204ENST00000530660 STK39Q9UEW8 545 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms