RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 BHMTQ93088 406 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 TIGD1Q96MW7 591 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 TMEM9BQ9NQ34 198 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 HESX1Q9UBX0 185 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 PSMA7O14818 248 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 HMBSP08397 361 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 GABRG2P18507 467 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 CORO1AP31146 461 aaKnown RBP21.92■■□□□ 1.1
SMPD1-204ENST00000530395 TKTL1P51854 596 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 YWHAGP61981 247 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMPD1-204ENST00000530395 SGO2Q562F6 1265 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 LYSMD4Q5XG99 296 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 SLC36A4Q6YBV0 504 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 TOGARAM2Q6ZUX3 1019 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 ARMCX6Q7L4S7 300 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 METTL14Q9HCE5 456 aaKnown RBP21.92■■□□□ 1.1
SMPD1-204ENST00000530395 MARCH2Q9P0N8 246 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 CALCOCO1Q9P1Z2 691 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 EVLQ9UI08 416 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-204ENST00000530395 MBD1Q9UIS9 605 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-204ENST00000530395 TSPAN16Q9UKR8 245 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 HCN2Q9UL51 889 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 PI4KAP42356 2102 aa21.92■■□□□ 1.1
SMPD1-204ENST00000530395 A0A1W2PQF6 199 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 TRIM49BA6NDI0 452 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 PATE3B3GLJ2 98 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 PRRT4C9JH25 899 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 XPO1O14980 1071 aaKnown RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 AP5Z1O43299 807 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 KCNK5O95279 499 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 ZBED1O96006 694 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 CD19P15391 556 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 TBXAS1P24557 533 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 PPP1R2P41236 205 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 PMS1P54277 932 aaKnown RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 LMAN2Q12907 356 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 SYT12Q8IV01 421 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 FRMD1Q8N878 549 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 IPO4Q8TEX9 1081 aaKnown RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 ERCC4Q92889 916 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 SLC35C1Q96A29 364 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 GABRG3Q99928 467 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 NUSAP1Q9BXS6 441 aaKnown RBP21.91■■□□□ 1.1
SMPD1-204ENST00000530395 LRRC4Q9HBW1 653 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 PLK2Q9NYY3 685 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 CEP295Q9C0D2 2601 aa21.91■■□□□ 1.1
SMPD1-204ENST00000530395 CACNA1BQ00975 2339 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 GFRA2O00451 464 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 ZNF217O75362 1048 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 KLKB1P03952 638 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 CYBBP04839 570 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 CISD3P0C7P0 127 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 PTGER3P43115 390 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 RPL6Q02878 288 aaKnown RBP21.9■■□□□ 1.1
SMPD1-204ENST00000530395 PDE4CQ08493 712 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 BST2Q10589 180 aaKnown RBP21.9■■□□□ 1.1
SMPD1-204ENST00000530395 TRIM61Q5EBN2 209 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 N4BP2L1Q5TBK1 243 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-204ENST00000530395 IPO9Q96P70 1041 aaKnown RBP21.9■■□□□ 1.1
SMPD1-204ENST00000530395 ACOX2Q99424 681 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 ULBP1Q9BZM6 244 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 OLA1Q9NTK5 396 aaKnown RBP21.9■■□□□ 1.1
SMPD1-204ENST00000530395 FBXO10Q9UK96 956 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 SLC27A6Q9Y2P4 619 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 GON4LQ3T8J9 2241 aa21.9■■□□□ 1.1
SMPD1-204ENST00000530395 SLC12A8A0AV02 714 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 PENKP01210 267 aaPredicted RBP21.89■■□□□ 1.09
SMPD1-204ENST00000530395 HOXD12P35452 270 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 E2F5Q15329 346 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 FYB2Q5VWT5 728 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 PM20D1Q6GTS8 502 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 DENND1CQ8IV53 801 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 SIX6OS1Q8N1H7 587 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 PLD4Q96BZ4 506 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 DHTKD1Q96HY7 919 aaPredicted RBP21.89■■□□□ 1.09
SMPD1-204ENST00000530395 CEP63Q96MT8 703 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 CACNA2D2Q9NY47 1150 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 ANGPTL2Q9UKU9 493 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 AGO1Q9UL18 857 aaKnown RBP21.89■■□□□ 1.09
SMPD1-204ENST00000530395 KIAA1257Q9ULG3 409 aa21.89■■□□□ 1.09
SMPD1-204ENST00000530395 MAP1BP46821 2468 aaKnown RBP21.89■■□□□ 1.09
SMPD1-204ENST00000530395 KMT2BQ9UMN6 2715 aaPredicted RBP21.88■■□□□ 1.09
SMPD1-204ENST00000530395 NPC1O15118 1278 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 SETSIPP0DME0 302 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 VDRP11473 427 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 NDUFV2P19404 249 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 FMO5P49326 533 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 NOVA1P51513 510 aaKnown RBP21.88■■□□□ 1.09
SMPD1-204ENST00000530395 IRX4P78413 519 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 ADIGQ0VDE8 80 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 CETN1Q12798 172 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 LRMPQ12912 555 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 STARD3Q14849 445 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 CCDC40Q4G0X9 1142 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 PSAPL1Q6NUJ1 521 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 CPXM2Q8N436 756 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 RNF139Q8WU17 664 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 UCMAQ8WVF2 138 aa21.88■■□□□ 1.09
SMPD1-204ENST00000530395 ATXN2Q99700 1313 aaKnown RBP21.87■■□□□ 1.09
SMPD1-204ENST00000530395 TULP2O00295 520 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms