RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 DONSONQ9NYP3 566 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 AURKCQ9UQB9 309 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 DCXO43602 365 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CETPP11597 493 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 BST1Q10588 318 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 PDK1Q15118 436 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 KRT80Q6KB66 452 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CTU1Q7Z7A3 348 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ATPAF2Q8N5M1 289 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 OR52K1Q8NGK4 314 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 MIPOL1Q8TD10 442 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ATXN2LQ8WWM7 1075 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CPT1BQ92523 772 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CLPTM1LQ96KA5 538 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SDR42E2A6NKP2 422 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 H0YGN5 161 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SH3BP5O60239 455 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 UGT1A9O60656 530 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 MPP2Q14168 576 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF268Q14587 947 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 PMF1Q6P1K2 205 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 NUP93Q8N1F7 819 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 EIF1ADQ8N9N8 165 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SLC16A10Q8TF71 515 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 UGT1A7Q9HAW7 530 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 UGT1A10Q9HAW8 530 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 UGT1A8Q9HAW9 530 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ADARB2Q9NS39 739 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SLC24A2Q9UI40 661 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 NFS1Q9Y697 457 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 MYH3P11055 1940 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 TOP3BO95985 862 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 TSPAN8P19075 237 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 EPHX2P34913 555 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 GRIA1P42261 906 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 CDKN2BP42772 138 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 KLC1Q07866 573 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 PIGZQ86VD9 579 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 TLCD1Q96CP7 247 aa12.75□□□□□ -0.37
SCN3B-206ENST00000530277 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
SCN3B-206ENST00000530277 GHRP10912 638 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 WDR4P57081 412 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 SLC25A3Q00325 362 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 RAB6CQ53S08 254 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 EFHC1Q5JVL4 640 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF572Q7Z3I7 529 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 HTR3CQ8WXA8 447 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 RAB6CQ9H0N0 254 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 COL14A1Q05707 1796 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 PAPSS1O43252 624 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 KRT36O76013 467 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 TMEM63AO94886 807 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 TRUB2O95900 331 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 BCAT1P54687 386 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 PEX6Q13608 980 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 GPR20Q99678 358 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 ULBP1Q9BZM6 244 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 CAB39LQ9H9S4 337 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 ETNK2Q9NVF9 386 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 LRFN2Q9ULH4 789 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 NCF1BA6NI72 391 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 NCF1CA8MVU1 366 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 DNAJC6O75061 913 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 RGS20O76081 388 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 GFAPP14136 432 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 NCF1P14598 390 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 EEF1B2P24534 225 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 YWHAZP63104 245 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 SLC6A3Q01959 620 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 CA9Q16790 459 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 BBS12Q6ZW61 710 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-206ENST00000530277 PYDC1Q8WXC3 89 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 APBA2Q99767 749 aa12.74□□□□□ -0.37
SCN3B-206ENST00000530277 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms