RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 ADAM28Q9UKQ2 775 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 LRFN2Q9ULH4 789 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 NDC80O14777 642 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 SYN3O14994 580 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 ACSL3O95573 720 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 TTC4O95801 387 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 ZFXP17010 805 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 ARL4AP40617 200 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 GBE1Q04446 702 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 FAAP100Q0VG06 881 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 KYNUQ16719 465 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 SCAMP5Q8TAC9 235 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 CPT1BQ92523 772 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 EDEM1Q92611 657 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 PRCCQ92733 491 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 ETNK2Q9NVF9 386 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 RRN3Q9NYV6 651 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 NINJ2Q9NZG7 142 aa16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-213ENST00000529611 TNFRSF10BO14763 440 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 AMPD1P23109 780 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 SLC10A2Q12908 348 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 DNAJC21Q5F1R6 531 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 BSPRYQ5W0U4 402 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 NCBP2-AS2Q69YL0 99 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 PCGF5Q86SE9 256 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 HOOK3Q86VS8 718 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 NTAN1Q96AB6 310 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 RTP4Q96DX8 246 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 PKNOX2Q96KN3 472 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 TMEM109Q9BVC6 243 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 GPR62Q9BZJ7 368 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 DDIT4Q9NX09 232 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 MARCH5Q9NX47 278 aa16.02■□□□□ 0.16
CCDC90B-213ENST00000529611 BCLAF3A2AJT9 711 aaKnown RBP16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 I6L893 689 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 ADRA1BP35368 520 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 GRIK1P39086 918 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 LMAN1P49257 510 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 SLC11A1P49279 550 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 SLC5A3P53794 718 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 AIF1P55008 147 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 TLE2Q04725 743 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 SCAPQ12770 1279 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 TRIM60Q495X7 471 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 EFHC2Q5JST6 749 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 PPIL6Q8IXY8 311 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 DCP1BQ8IZD4 617 aaKnown RBP16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 NAT8LQ8N9F0 302 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 RNF139Q8WU17 664 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 CRISPLD2Q9H0B8 497 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 ANLNQ9NQW6 1124 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 ARHGEF4Q9NR80 690 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 ABI2Q9NYB9 513 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 MFHAS1Q9Y4C4 1052 aa16.02■□□□□ 0.15
CCDC90B-213ENST00000529611 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 DCDC2CA8MYV0 355 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 KCNN4O15554 427 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 HOXA2O43364 376 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 AMHP03971 560 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 ALDH2P05091 517 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 NR1D1P20393 614 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 RBL1P28749 1068 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 CYP2C18P33260 490 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 NR2C2P49116 596 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 MRPL58Q14197 206 aaKnown RBP16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 EMC10Q5UCC4 262 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM171A1Q5VUB5 890 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 CEP128Q6ZU80 1094 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 C9orf72Q96LT7 481 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 DTLQ9NZJ0 730 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 BCCIPQ9P287 314 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 FBXW11Q9UKB1 542 aa16.01■□□□□ 0.15
CCDC90B-213ENST00000529611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 H3BRJ5 948 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 PARNO95453 639 aaKnown RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 MAGEA4P43358 317 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 SKOR1P84550 965 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 GAD2Q05329 585 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 XRCC4Q13426 336 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 NFE2Q16621 373 aaPredicted RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 KDM7AQ6ZMT4 941 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 CEP57Q86XR8 500 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TAB3Q8N5C8 712 aaPredicted RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 EPS8L3Q8TE67 593 aaKnown RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 LRRN4Q8WUT4 740 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC90B-213ENST00000529611 B3GALT6Q96L58 329 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 TOX2Q96NM4 488 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
CCDC90B-213ENST00000529611 NOVA2Q9UNW9 492 aaKnown RBP16■□□□□ 0.15
CCDC90B-213ENST00000529611 ZNF638Q14966 1978 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms