RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 MTMR12Q9C0I1 747 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 C6orf106Q9H6K1 298 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 INTS13Q9NVM9 706 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 TLR5O60602 858 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 PENKP01210 267 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 DDIT3P35638 169 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 UBA7P41226 1012 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ACADVLP49748 655 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 BCAT1P54687 386 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 C21orf59P57076 290 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 RACK1P63244 317 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 MCM6Q14566 821 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 CCDC83Q8IWF9 413 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 OR6B3Q8NGW1 331 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 OR2T3Q8NH03 318 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 SCAMP5Q8TAC9 235 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 SAP25Q8TEE9 199 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 RAD54LQ92698 747 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 BIRC7Q96CA5 298 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 SAAL1Q96ER3 474 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 LGMNQ99538 433 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ZNF518BQ9C0D4 1074 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 IKZF4Q9H2S9 585 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ELOVL2Q9NXB9 296 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 ZNF510Q9Y2H8 683 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 MYH11P35749 1972 aa12.28□□□□□ -0.44
AMBRA1-207ENST00000529553 SLC28A2O43868 658 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 SEMA4FO95754 770 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 ITGAVP06756 1048 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 GLDCP23378 1020 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 ACSL1P33121 698 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 NEK4P51957 841 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 SLC5A3P53794 718 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 MFAP3P55082 362 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 DNAJC3Q13217 504 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 CAMK2GQ13555 558 aaPredicted RBP12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 ZNF234Q14588 700 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 KLHDC10Q6PID8 442 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 FAM124AQ86V42 546 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 LSMEM2Q8N112 164 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 DCBLD1Q8N8Z6 715 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 B3GALNT2Q8NCR0 500 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 TTC9Q92623 222 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 PIWIL1Q96J94 861 aaKnown RBP12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 HIC2Q96JB3 615 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 KCNK16Q96T55 309 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 MRPL45Q9BRJ2 306 aaKnown RBP12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 DPH1Q9BZG8 443 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 SEMA4CQ9C0C4 833 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 BTBD1Q9H0C5 482 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 FBXO44Q9H4M3 255 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 FBRSQ9HAH7 460 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 SGK2Q9HBY8 427 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 CYLDQ9NQC7 956 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 TLR8Q9NR97 1041 aaKnown RBP12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 PTPRJQ12913 1337 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 MUC22E2RYF6 1773 aaPredicted RBP12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 KNL1Q8NG31 2342 aa12.27□□□□□ -0.45
AMBRA1-207ENST00000529553 COL5A1P20908 1838 aaPredicted RBP12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 A8MXQ7 604 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 CLDN5O00501 218 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 TBX18O95935 607 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 EPHX1P07099 455 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 CKMT2P17540 419 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 ABCB4P21439 1286 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 CHKAP35790 457 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 CLDN6P56747 220 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 E2F1Q01094 437 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 IL9RQ01113 521 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 GRIN1Q05586 938 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 Q6ZNB5 142 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 DYMQ7RTS9 669 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 OR5B17Q8NGF7 314 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 ARID3AQ99856 593 aa12.26□□□□□ -0.45
AMBRA1-207ENST00000529553 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms