RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 SNX27Q96L92 541 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 MECRQ9BV79 373 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 TLE6Q9H808 572 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 DERAQ9Y315 318 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 ZNF487B1APH4 448 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CSH1P0DML2 217 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CSH2P0DML3 217 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CCDC130P13994 396 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 GRIA1P42261 906 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 MAGEA3P43357 314 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CLNS1AP54105 237 aaKnown RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 MRPS5P82675 430 aaKnown RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 WASHC2DQ5SRD0 308 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 ARHGAP17Q68EM7 881 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 C4orf22Q6V702 233 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 ZNF534Q76KX8 674 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 UNC93AQ86WB7 457 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CENPIQ92674 756 aaPredicted RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 SKA1Q96BD8 255 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 PTCD3Q96EY7 689 aaKnown RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 KCTD15Q96SI1 283 aaPredicted RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 MIPEPQ99797 713 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 C11orf84Q9BUA3 381 aaPredicted RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 TUBB6Q9BUF5 446 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 FBXO6Q9NRD1 293 aaPredicted RBP10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 SETD4Q9NVD3 440 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 AP4E1Q9UPM8 1137 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 ZSWIM8A7E2V4 1837 aa10.88□□□□□ -0.67
AP002008.3-201ENST00000528614 FAM237BA0A1B0GVD1 139 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 KLF11O14901 512 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 HNRNPCL1O60812 293 aaKnown RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 DNAJC6O75061 913 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 KRT38O76015 456 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 IL1BP01584 269 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 GSTA2P09210 222 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 MYL2P10916 166 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ZFXP17010 805 aaPredicted RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CALB2P22676 271 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 AMPD1P23109 780 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 LMO2P25791 158 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CATSPER4Q7RTX7 472 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CCDC185Q8N715 623 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 LRRC52Q8N7C0 313 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 TTC8Q8TAM2 541 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CADM1Q9BY67 442 aaKnown RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ADAMTS10Q9H324 1103 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 DENND2DQ9H6A0 471 aaPredicted RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 GJD2Q9UKL4 321 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 MFHAS1Q9Y4C4 1052 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 SCN1AP35498 2009 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 FAM159BA6NKW6 160 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 KIF3CO14782 793 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CCDC22O60826 627 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 GNAZP19086 355 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 TPSB2P20231 275 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CCNFP41002 786 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 NR2C2P49116 596 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CCNG1P51959 295 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 TPSAB1Q15661 275 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ANKRD20A2Q5SQ80 823 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 MROH9Q5TGP6 573 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ANKRD20A1Q5TYW2 823 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ANKRD20A3Q5VUR7 823 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 C9orf57Q5W0N0 161 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 SLC27A1Q6PCB7 646 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 SLC26A9Q7LBE3 791 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 KIRREL3Q8IZU9 778 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 ANKRD52Q8NB46 1076 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 GSDMBQ8TAX9 411 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 PPP1R13LQ8WUF5 828 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CSPG4P5Q96PW8 444 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 NUDCD1Q96RS6 583 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 BTBD10Q9BSF8 475 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 SLC5A4Q9NY91 659 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 PCDHA11Q9Y5I1 949 aa10.87□□□□□ -0.67
AP002008.3-201ENST00000528614 CITO14578 2027 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 HMX2A2RU54 273 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 CYB561D2O14569 222 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 ENTPD5O75356 428 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 TPBGLP0DKB5 382 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 SMPD1P17405 629 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 AKAP5P24588 427 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 GNL1P36915 607 aaPredicted RBP10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 CCNA1P78396 465 aa10.86□□□□□ -0.67
AP002008.3-201ENST00000528614 SNAPC2Q13487 334 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms