RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SULT1E1P49888 294 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TUBP50607 506 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NAP1L1P55209 391 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ATP11AP98196 1134 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 EFEMP1Q12805 493 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MESDQ14696 234 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SLC25A52Q3SY17 297 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ATAT1Q5SQI0 421 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DAB2IPQ5VWQ8 1189 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CES5AQ6NT32 575 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 BNIPLQ7Z465 357 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TAC4Q86UU9 113 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 RNF10Q8N5U6 811 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ARFGAP1Q8N6T3 406 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CENPIQ92674 756 aaPredicted RBP12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CNPY3Q9BT09 278 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GOLPH3Q9H4A6 298 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 IP6K2Q9UHH9 426 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CAPN6Q9Y6Q1 641 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GRID2IPA4D2P6 1211 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TMEM110-MUSTN1A8MSY1 372 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 M0QYT0 321 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PROSCO94903 275 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 OLFM2O95897 454 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TRUB2O95900 331 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 FSHRP23945 695 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ATP5C1P36542 298 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ATXN1P54253 815 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 EIF4EBP2Q13542 120 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CBX2Q14781 532 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CDO1Q16878 200 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 KLHDC10Q6PID8 442 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 FAM172AQ8WUF8 416 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MARCH2Q9P0N8 246 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 STAP1Q9ULZ2 295 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CLUHO75153 1309 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SYNJ2BP-COX16A0A087WUM0 186 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MBTPS2O43462 519 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ENDOD1O94919 500 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 HDCP19113 662 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 HDAC4P56524 1084 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TADA2BQ86TJ2 420 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MIB1Q86YT6 1006 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NIPA2Q8N8Q9 360 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 FAM204AQ9H8W3 233 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PIGVQ9NUD9 493 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DDIT4Q9NX09 232 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 COX16Q9P0S2 106 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 RASAL2Q9UJF2 1139 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 USP15Q9Y4E8 981 aaPredicted RBP12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 HYOU1Q9Y4L1 999 aa12.67□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TRAV19A0A0A6YYK7 116 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 IRAK2O43187 625 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PALMO75781 387 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 TCF4P15884 667 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DDX6P26196 483 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 MTHFRP42898 656 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NME3Q13232 169 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 IFI16Q16666 785 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PTCRAQ6ISU1 281 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 STRADAQ7RTN6 431 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SLFN11Q7Z7L1 901 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 DAAM2Q86T65 1068 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NPAS3Q8IXF0 933 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SUSD6Q92537 303 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 FGF13Q92913 245 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ZFRQ96KR1 1074 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 NACA2Q9H009 215 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 POMKQ9H5K3 350 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 SLITRK6Q9H5Y7 841 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 USTQ9Y2C2 406 aa12.66□□□□□ -0.38
TRAF3IP2-211ENST00000528599 ALG6Q9Y672 507 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms