RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 NUDT5Q9UKK9 219 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 TCRBV21S2A2A0A5A6 115 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 ANTXRLA6NF34 631 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 TM4SF5O14894 197 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 KHNYNO15037 678 aaKnown RBP14.87□□□□□ -0.03
CAPN1-212ENST00000527887 MDM4O15151 490 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 MAP3K13O43283 966 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 ZNF217O75362 1048 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 FGFR1OPO95684 399 aaKnown RBP14.87□□□□□ -0.03
CAPN1-212ENST00000527887 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-212ENST00000527887 KLKB1P03952 638 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 ADRB1P08588 477 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 HOXB2P14652 356 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 CD19P15391 556 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 HOXD12P35452 270 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 ZNF445P59923 1031 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 PDE4CQ08493 712 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 CCDC6Q16204 474 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 GOLGA7BQ2TAP0 167 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 MAP7D1Q3KQU3 841 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 PPM1JQ5JR12 505 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 TTI2Q6NXR4 508 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 LCLAT1Q6UWP7 414 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 CYP2U1Q7Z449 544 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 CHPFQ8IZ52 775 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 UBR7Q8N806 425 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 HMGB4Q8WW32 186 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 GABRG3Q99928 467 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 ULBP1Q9BZM6 244 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 CNGB3Q9NQW8 809 aa14.87□□□□□ -0.03
CAPN1-212ENST00000527887 AGO1Q9UL18 857 aaKnown RBP14.87□□□□□ -0.03
CAPN1-212ENST00000527887 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
CAPN1-212ENST00000527887 LAMA1P25391 3075 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 SLC12A8A0AV02 714 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 PPP1R3GB7ZBB8 358 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 O00370 1275 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 AP5Z1O43299 807 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 LATS1O95835 1130 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 CORO1AP31146 461 aaKnown RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 MARSP56192 900 aaKnown RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 GCNT1Q02742 428 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 MORC3Q14149 939 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 TRIP4Q15650 581 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 CNGA2Q16280 664 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 FYB2Q5VWT5 728 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 RNF43Q68DV7 783 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 SMYD5Q6GMV2 418 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 FAM217AQ8IXS0 508 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 SIX6OS1Q8N1H7 587 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 TRIML1Q8N9V2 468 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 RNF139Q8WU17 664 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 IRX2Q9BZI1 471 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 ABCC13Q9NSE7 274 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 EVLQ9UI08 416 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-212ENST00000527887 INVSQ9Y283 1065 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
CAPN1-212ENST00000527887 A0A1W2PQF6 199 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 PRRT4C9JH25 899 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 TRIM24O15164 1050 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 TIMM44O43615 452 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 BCKDHBP21953 392 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 DHPSP49366 369 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-212ENST00000527887 LMAN2Q12907 356 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 LRMPQ12912 555 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 EIF4HQ15056 248 aaKnown RBP14.85□□□□□ -0.03
CAPN1-212ENST00000527887 PKDCCQ504Y2 493 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 DAB2IPQ5VWQ8 1189 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 EGFLAMQ63HQ2 1017 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 ISM2Q6H9L7 571 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 KLHL10Q6JEL2 608 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 TMEM270Q6UE05 265 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 BHLHA9Q7RTU4 235 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 SYT12Q8IV01 421 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 PPM1KQ8N3J5 372 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
CAPN1-212ENST00000527887 IRGQQ8WZA9 623 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 EDEM2Q9BV94 578 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 LSM14BQ9BX40 385 aaKnown RBP14.85□□□□□ -0.03
CAPN1-212ENST00000527887 RXFP3Q9NSD7 469 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 HCN2Q9UL51 889 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 PCDHB4Q9Y5E5 795 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 SDK1Q7Z5N4 2213 aa14.85□□□□□ -0.03
CAPN1-212ENST00000527887 HMBSP08397 361 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 GABRG2P18507 467 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 BMP6P22004 513 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 MFAP3P55082 362 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 KCNH2Q12809 1159 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 PAK1Q13153 545 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 MPPE1Q53F39 396 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms