RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CSH2P0DML3 217 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 OR1E1P30953 314 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 RENBPP51606 427 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 RETSATQ6NUM9 610 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 NUP93Q8N1F7 819 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 DNPEPQ9ULA0 475 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 CBX4O00257 560 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 H2AFXP16104 143 aaPredicted RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 GUCY1A3Q02108 690 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 CREMQ03060 361 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 KCNT2Q6UVM3 1135 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 ACAD11Q709F0 780 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 BLOC1S5Q8TDH9 187 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 NT5MQ9NPB1 228 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 MARF1Q9Y4F3 1742 aaKnown RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 OPHN1O60890 802 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 AKT1P31749 480 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 PTPN20Q4JDL3 420 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 POLNQ7Z5Q5 900 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 TTPALQ9BTX7 342 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 OR12D3Q9UGF7 316 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 MDH1P40925 334 aaKnown RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 JAM2P57087 298 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 MRPS5P82675 430 aaKnown RBP15.55■□□□□ 0.08
USP47-207ENST00000527733 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 ANKZF1Q9H8Y5 726 aa15.55■□□□□ 0.08
USP47-207ENST00000527733 HACD1B0YJ81 288 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 CFAP99D6REC4 459 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 LILRA4P59901 499 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 SDE2Q6IQ49 451 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 GRAMD1AQ96CP6 724 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 CDC42EP4Q9H3Q1 356 aaKnown RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 PCMTD2Q9NV79 361 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 DCTN4Q9UJW0 460 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 RGS20O76081 388 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 PYGLP06737 847 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 PCK1P35558 622 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 MATKP42679 507 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 RHOAP61586 193 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 TSNAXIP1Q2TAA8 658 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 HECTD3Q5T447 861 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 SPPL2BQ8TCT7 592 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 FBXL18Q96ME1 805 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 APOL2Q9BQE5 337 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 SNRNP25Q9BV90 132 aaKnown RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 CHST7Q9NS84 486 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 TRHDEQ9UKU6 1024 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 C2orf81A6NN90 581 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 DNALI1O14645 258 aaPredicted RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 GFAPP14136 432 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 CTNNB1P35222 781 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 CCDC15Q0P6D6 951 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 SMARCB1Q12824 385 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 FAM187BQ17R55 369 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 ZC3H12AQ5D1E8 599 aaKnown RBP15.54■□□□□ 0.08
USP47-207ENST00000527733 ILDR2Q71H61 639 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 NLRP14Q86W24 1093 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 LGI2Q8N0V4 545 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 HES6Q96HZ4 224 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 HACD3Q9P035 362 aa15.54■□□□□ 0.08
USP47-207ENST00000527733 TMEM191CA6NGB0 347 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ARL5CA6NH57 179 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 KCNK1O00180 336 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ASMTLO95671 621 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 TTC4O95801 387 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 EOMESO95936 686 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 CKBP12277 381 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 MINDY3Q9H8M7 445 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ALG13Q9NP73 1137 aaKnown RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 FAM8A1Q9UBU6 413 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 EIF3HO15372 352 aaKnown RBP eCLIP15.53■□□□□ 0.08
USP47-207ENST00000527733 KITP10721 976 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 CHN1P15882 459 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ARFIP2P53365 341 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 RAD23BP54727 409 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ATP13A4Q4VNC1 1196 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 FSCBQ5H9T9 825 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 TMA16Q96EY4 203 aaKnown RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 KLF6Q99612 283 aaPredicted RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 FUT8Q9BYC5 575 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 NFKBIZQ9BYH8 718 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 SLC25A13Q9UJS0 675 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 VANGL2Q9ULK5 521 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 VPS9D1Q9Y2B5 631 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 ADH1AP07327 375 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 CLCNKBP51801 687 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 MROH9Q5TGP6 573 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 TAPT1Q6NXT6 567 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 DRC3Q9H069 523 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 APOBEC3GQ9HC16 384 aaKnown RBP15.53■□□□□ 0.08
USP47-207ENST00000527733 ATP13A1Q9HD20 1204 aa15.53■□□□□ 0.08
USP47-207ENST00000527733 SUN2Q9UH99 717 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms