RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 AGO1Q9UL18 857 aaKnown RBP27.56■■■□□ 2
TSPAN4-217ENST00000527644 SART1O43290 800 aaKnown RBP27.55■■■□□ 2
TSPAN4-217ENST00000527644 CACNG3O60359 315 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 LTFP02788 710 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 TPM2P07951 284 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 TYRP14679 529 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 CNR2P34972 360 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 KDSRQ06136 332 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 KRT31Q15323 416 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 C2orf27AQ580R0 203 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 KLHDC7AQ5VTJ3 777 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 HEATR6Q6AI08 1181 aaKnown RBP27.55■■■□□ 2
TSPAN4-217ENST00000527644 MSANTD2Q6P1R3 559 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 NUDT18Q6ZVK8 323 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 SCUBE3Q8IX30 993 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 CLEC4CQ8WTT0 213 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 TMEM63CQ9P1W3 806 aa27.55■■■□□ 2
TSPAN4-217ENST00000527644 CCDC163A0A0D9SF12 145 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 TBC1D3BA6NDS4 549 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 HARS2P49590 506 aaKnown RBP27.54■■■□□ 2
TSPAN4-217ENST00000527644 MYL5Q02045 173 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 DMC1Q14565 340 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 TMEM110Q86TL2 294 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 WDR5BQ86VZ2 330 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 DENND1CQ8IV53 801 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 VPS16Q9H269 839 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 POLR3BQ9NW08 1133 aaPredicted RBP27.54■■■□□ 2
TSPAN4-217ENST00000527644 CYTH4Q9UIA0 394 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 PCDHGC3Q9UN70 934 aa27.54■■■□□ 2
TSPAN4-217ENST00000527644 CLCN1P35523 988 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 BPIFB4P59827 614 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 HSF5Q4G112 596 aaPredicted RBP27.53■■■□□ 2
TSPAN4-217ENST00000527644 SFTPA1Q8IWL2 248 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 FAM71AQ8IYT1 594 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 CPXM2Q8N436 756 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 LSM14BQ9BX40 385 aaKnown RBP27.53■■■□□ 2
TSPAN4-217ENST00000527644 DNAJC17Q9NVM6 304 aaKnown RBP27.53■■■□□ 2
TSPAN4-217ENST00000527644 KIAA1549LQ6ZVL6 1849 aa27.53■■■□□ 2
TSPAN4-217ENST00000527644 EP300Q09472 2414 aaPredicted RBP27.52■■■□□ 2
TSPAN4-217ENST00000527644 HOXC13P31276 330 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 RAPGEF1Q13905 1077 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 DRAP1Q14919 205 aaPredicted RBP27.52■■■□□ 2
TSPAN4-217ENST00000527644 GRAMD4Q6IC98 578 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 TERB1Q8NA31 727 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 ANKRD20A12PQ8NF67 263 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 KCNV2Q8TDN2 545 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 NAA15Q9BXJ9 866 aaKnown RBP27.52■■■□□ 2
TSPAN4-217ENST00000527644 LHX5Q9H2C1 402 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 MMP17Q9ULZ9 603 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 FHOD1Q9Y613 1164 aa27.52■■■□□ 2
TSPAN4-217ENST00000527644 E5RJQ4 531 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 HRO43593 1189 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 UCHL3P15374 230 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 KRT9P35527 623 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 KIR2DL1P43626 348 aaPredicted RBP27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 TYRO3Q06418 890 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 PDCLQ13371 301 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 FKBP15Q5T1M5 1219 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 BEND5Q7L4P6 421 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 SLC47A2Q86VL8 602 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 FAM217AQ8IXS0 508 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 RUBCNQ92622 972 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 TRIM62Q9BVG3 475 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 PLCB1Q9NQ66 1216 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 SMG5Q9UPR3 1016 aaKnown RBP27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 WDR87Q6ZQQ6 2873 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 OTOGLQ3ZCN5 2332 aa27.51■■□□□ 1.99
TSPAN4-217ENST00000527644 GPR179Q6PRD1 2367 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 ANTXRLA6NF34 631 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 PAPSS1O43252 624 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 LATS1O95835 1130 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 PENKP01210 267 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 FYNP06241 537 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 PNMA6AP0CW24 399 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 CHRM1P11229 460 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 NCAM1P13591 858 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 TIE1P35590 1138 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 WDTC1Q8N5D0 677 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 IL17RCQ8NAC3 791 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 FAM149B1Q96BN6 582 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 HHIPQ96QV1 700 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 PLK2Q9NYY3 685 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 LIMA1Q9UHB6 759 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 FBXO10Q9UK96 956 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 GVINP1Q7Z2Y8 2422 aa27.5■■□□□ 1.99
TSPAN4-217ENST00000527644 TRIM24O15164 1050 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 MSI1O43347 362 aaKnown RBP27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 APBB3O95704 486 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 CYBBP04839 570 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 PXNP49023 591 aaPredicted RBP27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 DGKGP49619 791 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 C10orf76Q5T2E6 689 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 EMC10Q5UCC4 262 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 FYB2Q5VWT5 728 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 CCDC33Q8N5R6 958 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 ALLCQ8N6M5 410 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 BHMTQ93088 406 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 NOX5Q96PH1 765 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 STK33Q9BYT3 514 aa27.49■■□□□ 1.99
TSPAN4-217ENST00000527644 NAT10Q9H0A0 1025 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms