RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
CCS-202ENST00000525435 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
CCS-202ENST00000525435 NAALADL1Q9UQQ1 740 aa12.92□□□□□ -0.34
CCS-202ENST00000525435 TLR6Q9Y2C9 796 aa12.92□□□□□ -0.34
CCS-202ENST00000525435 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
CCS-202ENST00000525435 SIGLEC16A6NMB1 481 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 MAN2B1O00754 1011 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 DAB1O75553 588 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 NFATC1O95644 943 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 F9P00740 461 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 IGLV3-25P01717 112 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 IGLV3-27P01718 113 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 FTLP02792 175 aaPredicted RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 MYBL1P10243 752 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 SLC2A3P11169 496 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 CHKAP35790 457 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 RUNX3Q13761 415 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 TAF5Q15542 800 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 EML3Q32P44 896 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 SYPL2Q5VXT5 272 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 BMP8AQ7Z5Y6 402 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 RALGPS2Q86X27 583 aaPredicted RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 DEFB106AQ8N104 65 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 PGAP3Q96FM1 320 aaPredicted RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 NELL2Q99435 816 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 C11orf70Q9BRQ4 267 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 DDX23Q9BUQ8 820 aaKnown RBP12.91□□□□□ -0.34
CCS-202ENST00000525435 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 FBXL21Q9UKT6 434 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 DENND4CQ5VZ89 1909 aa12.91□□□□□ -0.34
CCS-202ENST00000525435 ANAPC1Q9H1A4 1944 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 MDM4O15151 490 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ADCY5O95622 1261 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 TRUB2O95900 331 aaKnown RBP12.9□□□□□ -0.34
CCS-202ENST00000525435 KRT3P12035 628 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 STARD6P59095 220 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
CCS-202ENST00000525435 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ACBD5Q5T8D3 534 aaPredicted RBP12.9□□□□□ -0.34
CCS-202ENST00000525435 Q6ZNB5 142 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 CPA6Q8N4T0 437 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 SLC39A13Q96H72 371 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
CCS-202ENST00000525435 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 NPY6RQ99463 290 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCS-202ENST00000525435 C1QTNF1Q9BXJ1 281 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ECT2Q9H8V3 914 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 ARHGEF3Q9NR81 526 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCS-202ENST00000525435 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 SLC12A6Q9UHW9 1150 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 MRPS17Q9Y2R5 130 aaKnown RBP12.9□□□□□ -0.34
CCS-202ENST00000525435 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
CCS-202ENST00000525435 F5P12259 2224 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 A0A087X0T9 212 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 ANKRD62A6NC57 917 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 IRAK2O43187 625 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 GRAP2O75791 330 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 ADH1CP00326 375 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 KLKB1P03952 638 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 FAM228BP0C875 321 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 EIF4A3P38919 411 aaKnown RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 SLC11A2P49281 568 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 TBX4P57082 545 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 RNASE9P60153 205 aaKnown RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 ADGRF1Q5T601 910 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 FAM217AQ8IXS0 508 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 CPXM2Q8N436 756 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 DDX50Q9BQ39 737 aaKnown RBP12.89□□□□□ -0.35
CCS-202ENST00000525435 SELENOOQ9BVL4 669 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 OSBPL6Q9BZF3 934 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 EBF3Q9H4W6 596 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 HPS4Q9NQG7 708 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
CCS-202ENST00000525435 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
CCS-202ENST00000525435 TMEM221A6NGB7 291 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms