RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 HDAC4P56524 1084 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 NTHL1P78549 312 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 HADHQ16836 314 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 SCYL2Q6P3W7 929 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 KLHDC10Q6PID8 442 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 SYCE2Q6PIF2 218 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 GPR149Q86SP6 731 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 SHKBP1Q8TBC3 707 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 MYLIPQ8WY64 445 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 TCEAL4Q96EI5 215 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 PGAP3Q96FM1 320 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 ADAM33Q9BZ11 813 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 PIGVQ9NUD9 493 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■■■■■ 26.9
TSPAN4-213ENST00000524895 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 DNAI1Q9UI46 699 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 DNMT3LQ9UJW3 386 aa16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-213ENST00000524895 TRAV19A0A0A6YYK7 116 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 ENDOD1O94919 500 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 IGLV3-25P01717 112 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 DDX6P26196 483 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 MIPP30301 263 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 DNA2P51530 1060 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 TAS2R40P59535 323 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 TEAD2Q15562 447 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC5A9Q2M3M2 681 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 CTC1Q2NKJ3 1217 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 RAB6CQ53S08 254 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 PRSS36Q5K4E3 855 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 MEI1Q5TIA1 1274 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 TXNDC8Q6A555 127 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 CES5AQ6NT32 575 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 SYT10Q6XYQ8 523 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 BNIPLQ7Z465 357 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 FAM131BQ86XD5 332 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 RNF34Q969K3 372 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 PABPC5Q96DU9 382 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 NAPGQ99747 312 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 RAB6CQ9H0N0 254 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 SLITRK6Q9H5Y7 841 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 TMEM51Q9NW97 253 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 CLEC1BQ9P126 229 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 USP18Q9UMW8 372 aa16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CCDC66A2RUB6 948 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CTAGE9A4FU28 777 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 ENC1O14682 589 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 PSTPIP1O43586 416 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CKMP06732 381 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 KRT7P08729 469 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 MBL2P11226 248 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 FOSL2P15408 326 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 TCF4P15884 667 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 PFKLP17858 780 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CASQ1P31415 396 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CTNNA1P35221 906 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 TBX4P57082 545 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC25A11Q02978 314 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 ITIH3Q06033 890 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 NNTQ13423 1086 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 COL19A1Q14993 1142 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 RPS6KA1Q15418 735 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 TRIP4Q15650 581 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 GPR158Q5T848 1215 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 CD101Q93033 1021 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 ZWILCHQ9H900 591 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 TLR6Q9Y2C9 796 aa16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 HBS1LQ9Y450 684 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-213ENST00000524895 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 CLUHO75153 1309 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 NRG2O14511 850 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 MOSPD3O75425 235 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 OLFM2O95897 454 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ATP1A1P05023 1023 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 HMBSP08397 361 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 CEBPBP17676 345 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 HDCP19113 662 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 FSHRP23945 695 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 CTNNA2P26232 953 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 CCR1P32246 355 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 CXCR3P49682 368 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 DLX2Q07687 328 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms