RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MRPL46Q9H2W6 279 aaKnown RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 SERHLQ9NQF3 203 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 C9orf78Q9NZ63 289 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-208ENST00000524652 ABCF2Q9UG63 623 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 SPEF1Q9Y4P9 236 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 PCDHA3Q9Y5H8 950 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 RTL9Q8NET4 1388 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 COL6A3P12111 3177 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 FOCADQ5VW36 1801 aa3.58□□□□□ -1.84
CSDE1-208ENST00000524652 H0YIZ8 118 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 M0QYG6 137 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF213O14771 459 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 VPS4BO75351 444 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 TNKSO95271 1327 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ONECUT2O95948 504 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 IGHDP01880 384 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 FTLP02792 175 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 FAM163BP0C2L3 166 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PIM1P11309 404 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PDCP20941 246 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PTGER1P34995 402 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PHKA1P46020 1223 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 RECQLP46063 649 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ALDH9A1P49189 494 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 LOXL3P58215 753 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 FNDC1Q4ZHG4 1894 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 LRRC24Q50LG9 513 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 EMC10Q5UCC4 262 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 FAM160B1Q5W0V3 765 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ICE2Q659A1 982 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF626Q68DY1 528 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 C11orf87Q6NUJ2 197 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 MAST2Q6P0Q8 1798 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ATG9AQ7Z3C6 839 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 HEATR3Q7Z4Q2 680 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PRR18Q8N4B5 295 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 CPA6Q8N4T0 437 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 PRPF38AQ8NAV1 312 aaKnown RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 TNPO1Q92973 898 aaKnown RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 SNX27Q96L92 541 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-208ENST00000524652 DDX19BQ9UMR2 479 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 BTBD3Q9Y2F9 522 aa3.57□□□□□ -1.84
CSDE1-208ENST00000524652 CENPFP49454 3210 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 COL1A1P02452 1464 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF609O15014 1411 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 H0YIN7 160 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 MYO1FO00160 1098 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 NPHP1O15259 732 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 PPM1DO15297 605 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 TP73O15350 636 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 SLC16A3O15427 465 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 TAF5LO75529 589 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 CENPBP07199 599 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 IL6RP08887 468 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 ATXN1LP0C7T5 689 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 TYRP14679 529 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 NPR1P16066 1061 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 CCND1P24385 295 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 KLRK1P26718 216 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 PPIFP30405 207 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 EEFSECP57772 596 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 GPSM2P81274 684 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 GRAPQ13588 217 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 CCDC152Q4G0S7 254 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 TMEM240Q5SV17 173 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 PRAMEF17Q5VTA0 474 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 TMEM108Q6UXF1 575 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF66Q6ZN08 573 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 USP45Q70EL2 814 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 FANCBQ8NB91 859 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 FAM46DQ8NEK8 389 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF622Q969S3 477 aaKnown RBP eCLIP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 RBM17Q96I25 401 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 SIL1Q9H173 461 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 SH3BP4Q9P0V3 963 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 HESX1Q9UBX0 185 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 EXOC6BQ9Y2D4 811 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 RIPOR2Q9Y4F9 1068 aa3.56□□□□□ -1.84
CSDE1-208ENST00000524652 BAZ2AQ9UIF9 1905 aaKnown RBP3.56□□□□□ -1.84
CSDE1-208ENST00000524652 SPTBN5Q9NRC6 3674 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 ANKRD18BA2A2Z9 1011 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 TISP43B9A030 160 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 QSOX1O00391 747 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 PPP6CO00743 305 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 TUBB4AP04350 444 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 PDHA1P08559 390 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 HSPA1AP0DMV8 641 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 HSPA1BP0DMV9 641 aaKnown RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 FGFR2P21802 821 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 CYP2C18P33260 490 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 PXNP49023 591 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-208ENST00000524652 MAP2K6P52564 334 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 ZNF134P52741 427 aa3.55□□□□□ -1.84
CSDE1-208ENST00000524652 RPS8P62241 208 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 266.9 ms