RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 AP5Z1O43299 807 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 NFATC1O95644 943 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 SERPINC1P01008 464 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 GLI1P08151 1106 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 UBASH3AP57075 661 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 PON2Q15165 354 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 FILIP1LQ4L180 1135 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 SLC26A9Q7LBE3 791 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 EDEM3Q9BZQ6 932 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 NACA2Q9H009 215 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 CHRDQ9H2X0 955 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 SPHK2Q9NRA0 654 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 RBM12Q9NTZ6 932 aaKnown RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 MARK1Q9P0L2 795 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 AGO1Q9UL18 857 aaKnown RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 SH3BP1Q9Y3L3 701 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 HBS1LQ9Y450 684 aaKnown RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 HMBSP08397 361 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 MMP8P22894 467 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 SCNN1AP37088 669 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 SLC6A11P48066 632 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 YWHAZP63104 245 aaKnown RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 SLC6A3Q01959 620 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 RING1Q06587 406 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 C2CD6Q53TS8 623 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 RNF43Q68DV7 783 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 RSRC2Q7L4I2 434 aaKnown RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 NT5C3BQ969T7 300 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 FCRL2Q96LA5 508 aaPredicted RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 XPO4Q9C0E2 1151 aaKnown RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 KCNH6Q9H252 994 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 POPDC2Q9HBU9 364 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 C2orf42Q9NWW7 574 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 TMEM59LQ9UK28 342 aa12.48□□□□□ -0.41
CLN8-207ENST00000524258 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
CLN8-207ENST00000524258 VPS13AQ96RL7 3174 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 STK25O00506 426 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 EGFP01133 1207 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 PENKP01210 267 aaPredicted RBP12.47□□□□□ -0.41
CLN8-207ENST00000524258 CISD3P0C7P0 127 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 TDGF1P13385 188 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 NCAM1P13591 858 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 FERP16591 822 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 PRKCIP41743 596 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 NR1H3Q13133 447 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 NNTQ13423 1086 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 EFHC1Q5JVL4 640 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 ARTNQ5T4W7 220 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 FYB2Q5VWT5 728 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 HGSNATQ68CP4 663 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 PKN3Q6P5Z2 889 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 Q6ZS52 159 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 BNIPLQ7Z465 357 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 TAC4Q86UU9 113 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 DEFB106AQ8N104 65 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 CPXM2Q8N436 756 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 C18orf8Q96DM3 657 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 AGPAT1Q99943 283 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 DCLK3Q9C098 648 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 HCN2Q9UL51 889 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
CLN8-207ENST00000524258 FAM170AA1A519 330 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 K7EQS6 105 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 TRIM24O15164 1050 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 IRAK2O43187 625 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 HSF2BPO75031 334 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 GRAP2O75791 330 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 LATS1O95835 1130 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 GYPCP04921 128 aa12.46□□□□□ -0.41
CLN8-207ENST00000524258 ADH5P11766 374 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms