RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MRE11P49959 708 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 RING1Q06587 406 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 PDCLQ13371 301 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 TMEM25Q86YD3 366 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 PHTF2Q8N3S3 785 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 NKD2Q969F2 451 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 ACDQ96AP0 544 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 NOX5Q96PH1 765 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 VPS16Q9H269 839 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 ACP6Q9NPH0 428 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 FAM86C1Q9NVL1 165 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 FHOD1Q9Y613 1164 aa21.84■■□□□ 1.09
TRAPPC9-215ENST00000524162 SMTNL1A8MU46 457 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 K7ESF4 209 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 RNF40O75150 1001 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 CDH5P33151 784 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 KRT9P35527 623 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 MRPS21P82921 87 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 SATB1Q01826 763 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 ANO6Q4KMQ2 910 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 SYT13Q7L8C5 426 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 APTXQ7Z2E3 356 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 CAMKK1Q8N5S9 505 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 NDRG1Q92597 394 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 AZIN2Q96A70 460 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 ERGIC2Q96RQ1 377 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 PHOX2BQ99453 314 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 FUCA2Q9BTY2 467 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 LSM14BQ9BX40 385 aaKnown RBP21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 GANQ9H2C0 597 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 ASNSD1Q9NWL6 643 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 DEC1Q9P2X7 70 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 CYTH4Q9UIA0 394 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 SIK3Q9Y2K2 1263 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 CEP83Q9Y592 693 aa21.83■■□□□ 1.09
TRAPPC9-215ENST00000524162 GPR179Q6PRD1 2367 aa21.83■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC12A8A0AV02 714 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 F8VZ95 297 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 K7EQS6 105 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 SCAMP3O14828 347 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 CAVIN2O95810 425 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 IGLV3-27P01718 113 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 APODP05090 189 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 CNR2P34972 360 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 HARS2P49590 506 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 RAPGEF1Q13905 1077 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 NAIF1Q69YI7 327 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC47A2Q86VL8 602 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 ZNF677Q86XU0 584 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 FMNL3Q8IVF7 1028 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 SCUBE3Q8IX30 993 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 WDTC1Q8N5D0 677 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 ATRIPQ8WXE1 791 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 XPO6Q96QU8 1125 aaKnown RBP21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 ST7Q9NRC1 585 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 FBXO10Q9UK96 956 aa21.82■■□□□ 1.08
TRAPPC9-215ENST00000524162 PAPSS1O43252 624 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 TULP3O75386 442 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 KAT7O95251 611 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 PENKP01210 267 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 FYNP06241 537 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 CYP11B1P15538 503 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 CDK11BP21127 795 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 CORO1AP31146 461 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 ANO4Q32M45 955 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 NUGGCQ68CJ6 796 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 ZDHHC17Q8IUH5 632 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 UNC45BQ8IWX7 931 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 USP33Q8TEY7 942 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 EDEM1Q92611 657 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 BBS2Q9BXC9 721 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 ARHGEF4Q9NR80 690 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 AGO1Q9UL18 857 aaKnown RBP21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 STARD13Q9Y3M8 1113 aa21.81■■□□□ 1.08
TRAPPC9-215ENST00000524162 E5RJQ4 531 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 LSM8O95777 96 aaKnown RBP21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 CHRM1P11229 460 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 TYRP14679 529 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 ZNF165P49910 485 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 YWHAZP63104 245 aaKnown RBP21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 SKOR2Q2VWA4 1001 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 C12orf40Q86WS4 652 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 AOPEPQ8N6M6 819 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 CLEC4CQ8WTT0 213 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 PPP1R13BQ96KQ4 1090 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 SERPINB11Q96P15 392 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 MIS12Q9H081 205 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 POPDC2Q9HBU9 364 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 TMEM51Q9NW97 253 aa21.8■■□□□ 1.08
TRAPPC9-215ENST00000524162 PRR23AA6NEV1 266 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 GFRA2O00451 464 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC6A11P48066 632 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 JAM2P57087 298 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 EFHC1Q5JVL4 640 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 ADGRF1Q5T601 910 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 LONP2Q86WA8 852 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 DENND1CQ8IV53 801 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 DHX40Q8IX18 779 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 TERB1Q8NA31 727 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 TMEM35BQ8NCS4 154 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms