RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 PIGZQ86VD9 579 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 SFTPA1Q8IWL2 248 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ZC3H3Q8IXZ2 948 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ELOA2Q8IYF1 753 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 OLIG1Q8TAK6 271 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 RNF139Q8WU17 664 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 GOLGA1Q92805 767 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 PLD4Q96BZ4 506 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 NT5C1BQ96P26 610 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 OSER1Q9NX31 292 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 MARCH2Q9P0N8 246 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 NUDT5Q9UKK9 219 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 INVSQ9Y283 1065 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 COQ4Q9Y3A0 265 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC12A8A0AV02 714 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM8BA6NDV4 472 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 P4HA2O15460 535 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 GREM1O60565 184 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 ADAM23O75077 832 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 STC2O76061 302 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 GNA14O95837 355 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 HMBSP08397 361 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 PAEPP09466 180 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 VDRP11473 427 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 BCKDHBP21953 392 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 HOXD12P35452 270 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 FMO5P49326 533 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 HARS2P49590 506 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 ARID5AQ03989 594 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 MESP2Q0VG99 397 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 LRMPQ12912 555 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 STILQ15468 1287 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 EMC10Q5UCC4 262 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TCEAL6Q6IPX3 200 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 KLHL10Q6JEL2 608 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 ANKS1BQ7Z6G8 1248 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 SCD5Q86SK9 330 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 ENGASEQ8NFI3 743 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 PIGKQ92643 395 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 BHMTQ93088 406 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TCEAL3Q969E4 200 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 WBP2Q969T9 261 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC35C1Q96A29 364 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 NUSAP1Q9BXS6 441 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 SMOC1Q9H4F8 434 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM9BQ9NQ34 198 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 CALCOCO1Q9P1Z2 691 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TSPAN16Q9UKR8 245 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
CTNNA1-240ENST00000523912 TRIM49BA6NDI0 452 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 GFRA2O00451 464 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PMM2O15305 246 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 SYNCRIPO60506 623 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PENKP01210 267 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 CSRP1P21291 193 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 RPL6Q02878 288 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PDE4CQ08493 712 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ADIGQ0VDE8 80 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 EIF4HQ15056 248 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 RAB41Q5JT25 222 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 EGFLAMQ63HQ2 1017 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 FOXR2Q6PJQ5 311 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM270Q6UE05 265 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ARMCX6Q7L4S7 300 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 SYT12Q8IV01 421 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 CEP76Q8TAP6 659 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 NELFBQ8WX92 580 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 RLN3Q8WXF3 142 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ERCC4Q92889 916 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 TATDN2Q93075 761 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 GABRG3Q99928 467 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ULBP1Q9BZM6 244 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ZDHHC4Q9NPG8 344 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 CNGB3Q9NQW8 809 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 EVLQ9UI08 416 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 MAN1B1Q9UKM7 699 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC27A6Q9Y2P4 619 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 HBS1LQ9Y450 684 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 PCDHB4Q9Y5E5 795 aa9.28□□□□□ -0.92
CTNNA1-240ENST00000523912 ATRXP46100 2492 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 LNP1A1A4G5 178 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 C4orf47A7E2U8 309 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 M0QYV0 167 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 O00370 1275 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 SART1O43290 800 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 NDUFS2O75306 463 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 FBXO21O94952 628 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 LATS1O95835 1130 aa9.27□□□□□ -0.93
CTNNA1-240ENST00000523912 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.938e-7■□□□□ 10.2
CTNNA1-240ENST00000523912 WASP42768 502 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms