RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 CARM1Q86X55 608 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PALB2Q86YC2 1186 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 CHERPQ8IWX8 916 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 LTBP4Q8N2S1 1624 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 GIMAP8Q8ND71 665 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 HELQQ8TDG4 1101 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 BLOC1S5Q8TDH9 187 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 EPS8L3Q8TE67 593 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 ISOC1Q96CN7 298 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 EDC3Q96F86 508 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 DNAJC1Q96KC8 554 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 RHOBTB2Q9BYZ6 727 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 ACAD9Q9H845 621 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 NDFIP2Q9NV92 336 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 ABI2Q9NYB9 513 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 GTF2IRD1Q9UHL9 959 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MAPRE3Q9UPY8 281 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PCDHA1Q9Y5I3 950 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 RGPD3A6NKT7 1758 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 COL18A1P39060 1754 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 RGPD4Q7Z3J3 1758 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PRAMEF22A3QJZ6 481 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 H3BNH8 94 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 INO80B-WBP1J3KQ70 363 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 EEF2KO00418 725 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 GYG2O15488 501 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MSI1O43347 362 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 NMT2O60551 498 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 TCEA1P23193 301 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 LRPAP1P30533 357 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 BMPR1AP36894 532 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 HCAR3P49019 387 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 ENTPD1P49961 510 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 IST1P53990 364 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 BNC1Q01954 994 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PRKCEQ02156 737 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 SELENBP1Q13228 472 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 THOC5Q13769 683 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 EFTUD2Q15029 972 aaKnown RBP eCLIP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PCSK7Q16549 785 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 SLC18A3Q16572 532 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 EARS2Q5JPH6 523 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 SUSD4Q5VX71 490 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 KRT40Q6A162 431 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 TTI2Q6NXR4 508 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 SHQ1Q6PI26 577 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 RIPOR1Q6ZS17 1223 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 KRT25Q7Z3Z0 450 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 SGMS1Q86VZ5 419 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 APOBEC3FQ8IUX4 373 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MICALL2Q8IY33 904 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PACRGLQ8N7B6 248 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 RDH13Q8NBN7 331 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 PNMA1Q8ND90 353 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 DLG3Q92796 817 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MTMR8Q96EF0 704 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MOGAT1Q96PD6 335 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 VPS35Q96QK1 796 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 TUT1Q9H6E5 874 aaKnown RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 MARCH7Q9H992 704 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 POLMQ9NP87 494 aaPredicted RBP3.98□□□□□ -1.77
FAM49B-225ENST00000523288 C12orf4Q9NQ89 552 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 KCNK4Q9NYG8 393 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 TAB2Q9NYJ8 693 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 TBC1D14Q9P2M4 693 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 BCAP29Q9UHQ4 241 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 ANAPC5Q9UJX4 755 aa3.98□□□□□ -1.77
FAM49B-225ENST00000523288 COL1A1P02452 1464 aaPredicted RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 KLRF2D3W0D1 207 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 FOXN1O15353 648 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 DDX3YO15523 660 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 PDPK1O15530 556 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 PAHP00439 452 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 CD4P01730 458 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 ASNSP08243 561 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 POLR2BP30876 1174 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 FOXN2P32314 431 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 CHKAP35790 457 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 EIF4A3P38919 411 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 MAGEA11P43364 429 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 SNX16P57768 344 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 KRR1Q13601 381 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 NKX1-1Q15270 411 aaPredicted RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 BBS9Q3SYG4 887 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 DCAF6Q58WW2 860 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 ARL6IP4Q66PJ3 421 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 KCTD1Q719H9 257 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 GSTA5Q7RTV2 222 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 ZNF589Q86UQ0 364 aaPredicted RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 NLRP10Q86W26 655 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 ZNF677Q86XU0 584 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 TBC1D10CQ8IV04 446 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 FAM109AQ8N4B1 249 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 SHCBP1Q8NEM2 672 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 OSCP1Q8WVF1 389 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 SMG7Q92540 1137 aaKnown RBP3.97□□□□□ -1.77
FAM49B-225ENST00000523288 ARHGEF26Q96DR7 871 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 TMEM80Q96HE8 168 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 MS4A14Q96JA4 679 aa3.97□□□□□ -1.77
FAM49B-225ENST00000523288 MTMR9Q96QG7 549 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms