RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 USP25Q9UHP3 1055 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 IGF2RP11717 2491 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 RHOBTB3O94955 611 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 CORO1AP31146 461 aaKnown RBP16.21■□□□□ 0.19
MRPS28-209ENST00000522987 PSMC2P35998 433 aaKnown RBP16.21■□□□□ 0.19
MRPS28-209ENST00000522987 FAM193AP78312 1265 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 KRT85P78386 507 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 GFPT1Q06210 699 aaPredicted RBP16.21■□□□□ 0.19
MRPS28-209ENST00000522987 ADAM9Q13443 819 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 GEN1Q17RS7 908 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 DUOXA1Q1HG43 343 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 SLC36A4Q6YBV0 504 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 MINDY1Q8N5J2 469 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 TATDN2Q93075 761 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 MRGPRX1Q96LB2 322 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 ADAM33Q9BZ11 813 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 MARK1Q9P0L2 795 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 ZMIZ1Q9ULJ6 1067 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 CLEC4EQ9ULY5 219 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 SLC6A14Q9UN76 642 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 WASF3Q9UPY6 502 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 STARD13Q9Y3M8 1113 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
MRPS28-209ENST00000522987 CFAP47Q6ZTR5 3102 aa16.21■□□□□ 0.18
MRPS28-209ENST00000522987 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 NDUFS2O75306 463 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 RALAP11233 206 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 SIM1P81133 766 aaPredicted RBP16.2■□□□□ 0.18
MRPS28-209ENST00000522987 KRBA2Q6ZNG9 492 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
MRPS28-209ENST00000522987 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 DENND1CQ8IV53 801 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 HDDC3Q8N4P3 179 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 KCNV2Q8TDN2 545 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 TMEM174Q8WUU8 243 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 SORCS1Q8WY21 1168 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 CAMK1GQ96NX5 476 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 GABRG3Q99928 467 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 DUSP9Q99956 384 aaKnown RBP16.2■□□□□ 0.18
MRPS28-209ENST00000522987 SLC32A1Q9H598 525 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 TMEM8AQ9HCN3 771 aa16.2■□□□□ 0.18
MRPS28-209ENST00000522987 TULP2O00295 520 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 MAPK13O15264 365 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 TSPAN3O60637 253 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 SERPINF2P08697 491 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 IL12RB1P42701 662 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 MXI1P50539 228 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 RAD23BP54727 409 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 PLEKHG6Q3KR16 790 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 FUT11Q495W5 492 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-209ENST00000522987 TCERG1LQ5VWI1 586 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 FYB2Q5VWT5 728 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 PIGZQ86VD9 579 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 SLC4A11Q8NBS3 891 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 CAPN10Q9HC96 672 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 CISHQ9NSE2 258 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 KLK13Q9UKR3 277 aa16.19■□□□□ 0.18
MRPS28-209ENST00000522987 AGO1Q9UL18 857 aaKnown RBP16.19■□□□□ 0.18
MRPS28-209ENST00000522987 CHD6Q8TD26 2715 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 OPHN1O60890 802 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 ZNF217O75362 1048 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 MYL1P05976 194 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 RPL13P26373 211 aaKnown RBP16.18■□□□□ 0.18
MRPS28-209ENST00000522987 MFAP3P55082 362 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 YWHAGP61981 247 aaKnown RBP eCLIP16.18■□□□□ 0.18
MRPS28-209ENST00000522987 SEMA3BQ13214 749 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 GOLGA7BQ2TAP0 167 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 SPDYCQ5MJ68 293 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 PEAR1Q5VY43 1037 aaPredicted RBP16.18■□□□□ 0.18
MRPS28-209ENST00000522987 KRT39Q6A163 491 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 PIP4P1Q86T03 277 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
MRPS28-209ENST00000522987 ERCC4Q92889 916 aaPredicted RBP16.18■□□□□ 0.18
MRPS28-209ENST00000522987 TMEM176AQ96HP8 235 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 GPR174Q9BXC1 333 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 ULBP1Q9BZM6 244 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 CIPCQ9C0C6 399 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 MIR1-1HGQ9H1L0 117 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 PNPLA8Q9NP80 782 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 MARCH2Q9P0N8 246 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 USP3Q9Y6I4 520 aa16.18■□□□□ 0.18
MRPS28-209ENST00000522987 MEI4A8MW99 385 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 ARHGAP33O14559 1287 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 ZNF202O95125 648 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 TKTL1P51854 596 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 LRMPQ12912 555 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 PNOCQ13519 176 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 NFIL3Q16649 462 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 ZCWPW2Q504Y3 356 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 KLHDC10Q6PID8 442 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 TADA2BQ86TJ2 420 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 FAM124AQ86V42 546 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 CHCHD4Q8N4Q1 142 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 ZNF366Q8N895 744 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 CEP76Q8TAP6 659 aa16.17■□□□□ 0.18
MRPS28-209ENST00000522987 DDI1Q8WTU0 396 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms