RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 KIAA1549LQ6ZVL6 1849 aa19.58■□□□□ 0.72
SPIDR-220ENST00000522900 M0QYV0 167 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 LRP3O75074 770 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 WASP42768 502 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 APBA1Q02410 837 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 LMNB2Q03252 620 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 PUM1Q14671 1186 aaKnown RBP eCLIP19.57■□□□□ 0.72
SPIDR-220ENST00000522900 CSRP2Q16527 193 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 GJB7Q6PEY0 223 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 DENND1CQ8IV53 801 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 SIX6OS1Q8N1H7 587 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 ZNF513Q8N8E2 541 aaPredicted RBP19.57■□□□□ 0.72
SPIDR-220ENST00000522900 CNOT6LQ96LI5 555 aaKnown RBP19.57■□□□□ 0.72
SPIDR-220ENST00000522900 ACOX2Q99424 681 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 STRIP2Q9ULQ0 834 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 CNTN6Q9UQ52 1028 aa19.57■□□□□ 0.72
SPIDR-220ENST00000522900 GDF9O60383 454 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 EPN2O95208 641 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 SLC9A1P19634 815 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 DAOAP59103 153 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 SF3A2Q15428 464 aaKnown RBP19.56■□□□□ 0.72
SPIDR-220ENST00000522900 TRIP4Q15650 581 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-220ENST00000522900 HSF5Q4G112 596 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-220ENST00000522900 PREPLQ4J6C6 727 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-220ENST00000522900 USP39Q53GS9 565 aaKnown RBP19.56■□□□□ 0.72
SPIDR-220ENST00000522900 EOGTQ5NDL2 527 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 FYB2Q5VWT5 728 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 EGFLAMQ63HQ2 1017 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 PRR23CQ6ZRP0 262 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 FMNL3Q8IVF7 1028 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 MLKLQ8NB16 471 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 RLN3Q8WXF3 142 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 ERLEC1Q96DZ1 483 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 LOXL4Q96JB6 756 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 DCLK3Q9C098 648 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 SMOC1Q9H4F8 434 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 CNGB3Q9NQW8 809 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 FBXO10Q9UK96 956 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 ZNF510Q9Y2H8 683 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 STARD13Q9Y3M8 1113 aa19.56■□□□□ 0.72
SPIDR-220ENST00000522900 PRR5-ARHGAP8B1AHC4 643 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 PENKP01210 267 aaPredicted RBP19.55■□□□□ 0.72
SPIDR-220ENST00000522900 KRT5P13647 590 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 BCKDHBP21953 392 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 DGKGP49619 791 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 ATXN1P54253 815 aaKnown RBP19.55■□□□□ 0.72
SPIDR-220ENST00000522900 ARHGAP8P85298 464 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 DGLUCYQ7Z3D6 616 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 SCML4Q8N228 414 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 FRMD1Q8N878 549 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 KCNV2Q8TDN2 545 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 POLMQ9NP87 494 aaPredicted RBP19.55■□□□□ 0.72
SPIDR-220ENST00000522900 ACP6Q9NPH0 428 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 OLA1Q9NTK5 396 aaKnown RBP19.55■□□□□ 0.72
SPIDR-220ENST00000522900 CLEC4EQ9ULY5 219 aa19.55■□□□□ 0.72
SPIDR-220ENST00000522900 TCRBV21S2A2A0A5A6 115 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 MSI1O43347 362 aaKnown RBP19.54■□□□□ 0.72
SPIDR-220ENST00000522900 GBP1P32455 592 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 CHKAP35790 457 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 STILQ15468 1287 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 DENND1BQ6P3S1 775 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 TRIM65Q6PJ69 517 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 NUDT18Q6ZVK8 323 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 ERMP1Q7Z2K6 904 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 OLIG1Q8TAK6 271 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 RNF139Q8WU17 664 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 HMGB4Q8WW32 186 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 PLD4Q96BZ4 506 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 MIS12Q9H081 205 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 RXFP3Q9NSD7 469 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 ABCC13Q9NSE7 274 aa19.54■□□□□ 0.72
SPIDR-220ENST00000522900 EML5Q05BV3 1969 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.53■□□□□ 0.72
SPIDR-220ENST00000522900 A0A1W2PQF6 199 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 ALDH1A2O94788 518 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 NTSR1P30989 418 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 GPD2P43304 727 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 DPCR1Q3MIW9 517 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 PLA2G2CQ5R387 149 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 FAM217AQ8IXS0 508 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 HSFY1Q96LI6 401 aa19.53■□□□□ 0.72
SPIDR-220ENST00000522900 CDV3Q9UKY7 258 aaKnown RBP19.53■□□□□ 0.72
SPIDR-220ENST00000522900 BECN2A8MW95 431 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 WASH3PC4AMC7 463 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 TSPAN3O60637 253 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 RHOBTB1O94844 696 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 FYNP06241 537 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 ZNF806P0C7X5 589 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 HOXB2P14652 356 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 ANP32AP39687 249 aaKnown RBP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 MPLP40238 635 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 P2RY2P41231 377 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 MTIF2P46199 727 aaKnown RBP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 ELF2Q15723 593 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 ARHGAP44Q17R89 818 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 GEN1Q17RS7 908 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 KIAA1211LQ6NV74 962 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 GBP6Q6ZN66 633 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms