RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PRRG1O14668 218 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 SGSM2O43147 1006 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 NRDCO43847 1150 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PSPNO60542 156 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 AKAP3O75969 853 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CAVIN2O95810 425 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 LRG1P02750 347 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 MYL4P12829 197 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PTPN2P17706 415 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 AXLP30530 894 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 TRHRP34981 398 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-211ENST00000522802 GFRA1P56159 465 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PTENP60484 403 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PSMC5P62195 406 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 FCHO2Q0JRZ9 810 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 IFRD2Q12894 506 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CAPSQ13938 189 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 TEAD2Q15562 447 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 STXBP5Q5T5C0 1151 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 DAB2IPQ5VWQ8 1189 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 HLA-DQA1Q5Y7H0 255 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 SLC27A1Q6PCB7 646 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CD300LGQ6UXG3 332 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 MFSD6LQ8IWD5 586 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 HACE1Q8IYU2 909 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 NAT16Q8N8M0 369 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 ETNPPLQ8TBG4 499 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CSGALNACT1Q8TDX6 532 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CHFRQ96EP1 664 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 MSANTD3Q96H12 275 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 CEP170P1Q96L14 293 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 LRRC3BQ96PB8 259 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 JPH2Q9BR39 696 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-211ENST00000522802 TRPV4Q9HBA0 871 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 TMEM9BQ9NQ34 198 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 XPNPEP1Q9NQW7 623 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 ABCA7Q8IZY2 2146 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 PTPRDP23468 1912 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 ADAMTS9Q9P2N4 1935 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SLC27A2O14975 620 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 TBX3O15119 743 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 ZBTB43O43298 467 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 RECQL4O94761 1208 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 CPP00450 1065 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 IGHDP01880 384 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 PRB1P04280 392 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 THBDP07204 575 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 MLLT6P55198 1093 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 ARPP19P56211 112 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SIM1P81133 766 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SSRP1Q08945 709 aaKnown RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SPIRE1Q08AE8 756 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 ELAVL2Q12926 359 aaKnown RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 ELF2Q15723 593 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 UAP1L1Q3KQV9 507 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 GLRA4Q5JXX5 417 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 TTC22Q5TAA0 569 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SLC8B1Q6J4K2 584 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 FSTL4Q6MZW2 842 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 CEP128Q6ZU80 1094 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 RALGPS2Q86X27 583 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 ABHD4Q8TB40 342 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 KIRREL1Q96J84 757 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 SLITRK6Q9H5Y7 841 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 C8orf33Q9H7E9 229 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-211ENST00000522802 CYP4F11Q9HBI6 524 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 C6orf50Q9HD87 102 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 CEP72Q9P209 647 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 PFDN2Q9UHV9 154 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 INVSQ9Y283 1065 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 MYO18BQ8IUG5 2567 aa6.94□□□□□ -1.3
VPS13B-211ENST00000522802 PLXNB3Q9ULL4 1909 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 ATMQ13315 3056 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TSC2P49815 1807 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 PCNX2A6NKB5 2137 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TMEM189-UBE2V1I3L0A0 370 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 ZNF197O14709 1029 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 CHADO15335 359 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 SLC37A4O43826 429 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 B3GAT3O94766 335 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 ABLIM3O94929 683 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 PRAMEF12O95522 483 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 SNRPB2P08579 225 aaKnown RBP6.93□□□□□ -1.3
VPS13B-211ENST00000522802 BRCC3P46736 316 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
VPS13B-211ENST00000522802 CLCNKBP51801 687 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 EPHA5P54756 1037 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 FAM193AP78312 1265 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 TWF1Q12792 350 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 SLC14A2Q15849 920 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 LONRF2Q1L5Z9 754 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 Q4G0T1 1027 aa6.93□□□□□ -1.3
VPS13B-211ENST00000522802 HSF5Q4G112 596 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-211ENST00000522802 SLC35F1Q5T1Q4 408 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms