RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PTPRRQ15256 657 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 FAM90A2PQ658T7 463 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 NFRKBQ6P4R8 1299 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 PIK3AP1Q6ZUJ8 805 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 SPARTQ8N0X7 666 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 OR4N4Q8N0Y3 316 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 METTL25Q8N6Q8 603 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 TMEM171Q8WVE6 324 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 FAM136AQ96C01 138 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 ZSCAN31Q96LW9 406 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 KLK15Q9H2R5 256 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 SEMA4GQ9NTN9 838 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 SERTAD3Q9UJW9 196 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC27A6Q9Y2P4 619 aa5.39□□□□□ -1.55
HMGB1P1-201ENST00000522557 LRRC3CA6NJW4 275 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 MASP2O00187 686 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 CCNT2O60583 730 aaKnown RBP5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 RPP40O75818 363 aaKnown RBP5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 USP1O94782 785 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 CNPP09543 421 aaKnown RBP5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 ITPKBP27987 946 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 EPHA3P29320 983 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 BTBD16Q32M84 506 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 MAP3K21Q5TCX8 1036 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 C1orf122Q6ZSJ8 110 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 RAB11FIP2Q7L804 512 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 TRABD2AQ86V40 505 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 B3GALNT2Q8NCR0 500 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 OR6Y1Q8NGX8 325 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 HAPLN3Q96S86 360 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 FAM167BQ9BTA0 163 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 ASB6Q9NWX5 421 aa5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 C19orf53Q9UNZ5 99 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P1-201ENST00000522557 TRIAP1O43715 76 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 POLBP06746 335 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 RHOP08100 348 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 GRIA3P42263 894 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 LIFRP42702 1097 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 GATMP50440 423 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 PRKAG1P54619 331 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ELLP55199 621 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ACTR2P61160 394 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 VAMP2P63027 116 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 SATB1Q01826 763 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 TXNRD1Q16881 649 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 CCDC142Q17RM4 750 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 AASDHQ4L235 1098 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 RETSATQ6NUM9 610 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 MAVSQ7Z434 540 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 IZUMO1Q8IYV9 350 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 LRRC71Q8N4P6 559 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ABHD5Q8WTS1 349 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ZBTB45Q96K62 511 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 HIST1H2AAQ96QV6 131 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 C17orf80Q9BSJ5 609 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 INO80BQ9C086 356 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ZCWPW1Q9H0M4 648 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 UBN1Q9NPG3 1134 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 VPS45Q9NRW7 570 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC17A6Q9P2U8 582 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ST3GAL5Q9UNP4 418 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 ADGRA2Q96PE1 1338 aa5.37□□□□□ -1.55
HMGB1P1-201ENST00000522557 A8MVJ9 347 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 M0QZQ0 153 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 CTIFO43310 598 aaKnown RBP5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 TJP3O95049 919 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 FBLP22087 321 aaKnown RBP5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 BDNFP23560 247 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 MCM2P49736 904 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 NXPH1P58417 271 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 ITIH3Q06033 890 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 KCNJ12Q14500 433 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 LY6KQ17RY6 165 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 NBPF8Q3BBV2 869 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 ADCK5Q3MIX3 580 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 GALNTL6Q49A17 601 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 AKNAD1Q5T1N1 836 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC9A4Q6AI14 798 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 C2CD5Q86YS7 1000 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC2A12Q8TD20 617 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 OSCP1Q8WVF1 389 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 MCRS1Q96EZ8 462 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 AGXT2Q9BYV1 514 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 TPSD1Q9BZJ3 242 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 EPS8L2Q9H6S3 715 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 RIC8AQ9NPQ8 531 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 KLC4Q9NSK0 619 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 MAP3K20Q9NYL2 800 aaKnown RBP5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 PI4KBQ9UBF8 816 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 SLC13A4Q9UKG4 626 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 ZBTB1Q9Y2K1 713 aa5.36□□□□□ -1.55
HMGB1P1-201ENST00000522557 SETD1BQ9UPS6 1966 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms