RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 OTOAQ7RTW8 1153 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 KCTD20Q7Z5Y7 419 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SLCO6A1Q86UG4 719 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TXNRD3Q86VQ6 643 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TUSC5Q8IXB3 177 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ANKRD44Q8N8A2 993 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MIGA1Q8NAN2 632 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 PRPF31Q8WWY3 499 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 SEC14L1Q92503 715 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 DYDC2Q96IM9 177 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CCDC114Q96M63 670 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CMTM3Q96MX0 182 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 AGAP2Q99490 1192 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GPR20Q99678 358 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SPXQ9BT56 116 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MECRQ9BV79 373 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MRPL18Q9H0U6 180 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 ARHGEF3Q9NR81 526 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TPSG1Q9NRR2 321 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GIMAP4Q9NUV9 329 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ZNF70Q9UC06 446 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 CTNNA3Q9UI47 895 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MAGEL2Q9UJ55 1249 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SIT1Q9Y3P8 196 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 FPGT-TNNI3KV9GXZ4 949 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ERICH4A6NGS2 130 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 FADS2P1A8MWK0 482 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 WDR46O15213 610 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 ZBTB43O43298 467 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 CCP110O43303 1012 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SMPD2O60906 423 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SNX4O95219 450 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 OR2C1O95371 312 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 GNAI2P04899 355 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 EIF2S1P05198 315 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 HEXBP07686 556 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SELLP14151 372 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 IL4RP24394 825 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 MCM3P25205 808 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 NOS3P29474 1203 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 HSPA4P34932 840 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 PBX3P40426 434 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 CDH8P55286 799 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 RPL7AP62424 266 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 MXRA7P84157 204 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 HTD2P86397 168 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SF3A3Q12874 501 aaKnown RBP eCLIP4.28□□□□□ -1.72
SKP1-209ENST00000522552 GPS1Q13098 491 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 AIMP2Q13155 320 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 RPA4Q13156 261 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 CRYMQ14894 314 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 PCLAFQ15004 111 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 TYSND1Q2T9J0 566 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 C19orf54Q5BKX5 351 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 ABLIM2Q6H8Q1 611 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 FAM111BQ6SJ93 734 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 PLXDC1Q8IUK5 500 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 EGFL6Q8IUX8 553 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 ANKRD20A12PQ8NF67 263 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 REPS2Q8NFH8 660 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 KIF18AQ8NI77 898 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 WFDC12Q8WWY7 111 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 CASKIN2Q8WXE0 1202 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 MR1Q95460 341 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 VPS39Q96JC1 886 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 MFSD14AQ96MC6 490 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 FAM129AQ9BZQ8 928 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 OR10A5Q9H207 317 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 SLC25A32Q9H2D1 315 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 KAT14Q9H8E8 782 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 TLR9Q9NR96 1032 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 DDX43Q9NXZ2 648 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 EHD2Q9NZN4 543 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 KCND2Q9NZV8 630 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 ZNF624Q9P2J8 865 aaPredicted RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 CGNQ9P2M7 1197 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 XPR1Q9UBH6 696 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 HOOK1Q9UJC3 728 aaKnown RBP4.28□□□□□ -1.72
SKP1-209ENST00000522552 HPSEQ9Y251 543 aa4.28□□□□□ -1.72
SKP1-209ENST00000522552 H3BS24 57 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 BOLA2-SMG1P6H3BVE0 249 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PSMD14O00487 310 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PES1O00541 588 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 PGRMC2O15173 223 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 BCAT2O15382 392 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 SEPT4O43236 478 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 RRP9O43818 475 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 GCNT3O95395 438 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 CER1O95813 267 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PNPP00491 289 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 TUBBP07437 444 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms