RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 SFXN1Q9H9B4 322 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 TMPRSS4Q9NRS4 437 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLK4-210ENST00000522136 LCMT1Q9UIC8 334 aa13.95□□□□□ -0.18
CLK4-210ENST00000522136 DDX3YO15523 660 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 MOSPD3O75425 235 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 ENDOD1O94919 500 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 IGLV3-25P01717 112 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 EPHA5P54756 1037 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 SLC25A11Q02978 314 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 TMEM184AQ6ZMB5 413 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 CYP4V2Q6ZWL3 525 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 STRADAQ7RTN6 431 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 SHKBP1Q8TBC3 707 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 ALG3Q92685 438 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 HES6Q96HZ4 224 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 NAPGQ99747 312 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 MAGEB5Q9BZ81 275 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 WDR6Q9NNW5 1121 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 RRN3Q9NYV6 651 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 REV3LO60673 3130 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 CTAGE9A4FU28 777 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 IRAK2O43187 625 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 OAS1P00973 400 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 POU3F3P20264 500 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 CXCR5P32302 372 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 RDXP35241 583 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 PCK1P35558 622 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 PPP3CCP48454 512 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 KCNT1Q5JUK3 1230 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 ARL14EPQ8N8R7 260 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 PGAP3Q96FM1 320 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 GAS2L1Q99501 681 aaPredicted RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
CLK4-210ENST00000522136 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 KLHL11Q9NVR0 708 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 GPATCH2LQ9NWQ4 482 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 CLEC1BQ9P126 229 aa13.94□□□□□ -0.18
CLK4-210ENST00000522136 HMBSP08397 361 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 DESP17661 470 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 CDC25CP30307 473 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 PEX5P50542 639 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 EIF4EBP2Q13542 120 aaPredicted RBP13.93□□□□□ -0.18
CLK4-210ENST00000522136 TEAD2Q15562 447 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
CLK4-210ENST00000522136 RHOT1Q8IXI2 618 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 CCDC185Q8N715 623 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 MAB21L3Q8N8X9 362 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 MYLIPQ8WY64 445 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 NACA2Q9H009 215 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 CLDND1Q9NY35 253 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
CLK4-210ENST00000522136 SLC12A8A0AV02 714 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 I6L893 689 aaPredicted RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 KIF2AO00139 706 aaPredicted RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SRGAP2O75044 1071 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 TBX10O75333 385 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 CTNNA2P26232 953 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 CTNNA1P35221 906 aaKnown RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 HADHQ16836 314 aaKnown RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 PRSS36Q5K4E3 855 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 AADACL2Q6P093 401 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 POTEHQ6S545 545 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 ITFG1Q8TB96 612 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 RNF34Q969K3 372 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SLC46A2Q9BY10 475 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 GKN1Q9NS71 199 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 DNMT3LQ9UJW3 386 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 PAPLNO95428 1278 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 F9P00740 461 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 POU2F2P09086 479 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 RARAP10276 462 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 HDCP19113 662 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 GBP1P32455 592 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 LTBRP36941 435 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 CXCR3P49682 368 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms