RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PSTPIP1O43586 416 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ZDHHC11BP0C7U3 371 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 RARGP13631 454 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
SREK1-209ENST00000520953 PCK1P35558 622 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 RWDD2BP57060 319 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ADCY2Q08462 1091 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ZFYVE27Q5T4F4 411 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 VN1R2Q8NFZ6 395 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 HNRNPLLQ8WVV9 542 aaKnown RBP15.68■□□□□ 0.1
SREK1-209ENST00000520953 PSMG2Q969U7 264 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ABCC13Q9NSE7 274 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.68■□□□□ 0.15e-6■□□□□ 10.9
SREK1-209ENST00000520953 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 SNX10Q9Y5X0 201 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 HCFC2Q9Y5Z7 792 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 MTCL1Q9Y4B5 1905 aaKnown RBP15.67■□□□□ 0.1
SREK1-209ENST00000520953 ENDOD1O94919 500 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 KRT1P04264 644 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 EPHB3P54753 998 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 DEUP1Q05D60 604 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 MFSD7Q6UXD7 560 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
SREK1-209ENST00000520953 SNRNP25Q9BV90 132 aaKnown RBP15.67■□□□□ 0.1
SREK1-209ENST00000520953 FUT8Q9BYC5 575 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 IL21Q9HBE4 155 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 STAP1Q9ULZ2 295 aa15.67■□□□□ 0.1
SREK1-209ENST00000520953 ZNF840PA6NDX5 716 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 PRPSAP2O60256 369 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 IGLV3-25P01717 112 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 CSH1P0DML2 217 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 CSH2P0DML3 217 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 KRT10P13645 584 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 GJA1P17302 382 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 RDXP35241 583 aaKnown RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 GGCXP38435 758 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 NRIP1P48552 1158 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 EFEMP1Q12805 493 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 BEND6Q5SZJ8 279 aaPredicted RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 STRADAQ7RTN6 431 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 KATNAL2Q8IYT4 538 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 MYRFLQ96LU7 910 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 SLITRK1Q96PX8 696 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 HEMGNQ9BXL5 484 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 CARD9Q9H257 536 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.66■□□□□ 0.1
SREK1-209ENST00000520953 LRRD1A4D1F6 860 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 C2orf78A6NCI8 922 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 LRG1P02750 347 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 VEPH1Q14D04 833 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 ACAP1Q15027 740 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 TAF12Q16514 161 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 ZNF572Q7Z3I7 529 aaPredicted RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 MIB1Q86YT6 1006 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 TMC8Q8IU68 726 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 LRRC3Q9BY71 257 aa15.66■□□□□ 0.1
SREK1-209ENST00000520953 TLR8Q9NR97 1041 aaKnown RBP15.66■□□□□ 0.1
SREK1-209ENST00000520953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.66■□□□□ 0.1
SREK1-209ENST00000520953 ANAPC1Q9H1A4 1944 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 PRRC2BQ5JSZ5 2229 aaKnown RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 FGGP02679 453 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 SMAD3P84022 425 aaKnown RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 C2orf54Q08AI8 447 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 EIF4EBP2Q13542 120 aaPredicted RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 WDR93Q6P2C0 686 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 CCDC50Q8IVM0 306 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 SLC22A12Q96S37 553 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 AP1M1Q9BXS5 423 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 SMOC2Q9H3U7 446 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 TLE6Q9H808 572 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 XPO7Q9UIA9 1087 aaKnown RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 LCMT1Q9UIC8 334 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 COLQQ9Y215 455 aaPredicted RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 OBSL1O75147 1896 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 TLR5O60602 858 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 HMBSP08397 361 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 RALAP11233 206 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 CCR2P41597 374 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 MRPS25P82663 173 aaKnown RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 CYP4F8P98187 520 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 HADHQ16836 314 aaKnown RBP15.65■□□□□ 0.1
SREK1-209ENST00000520953 PPM1LQ5SGD2 360 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 C10orf120Q5SQS8 335 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 STXBP5Q5T5C0 1151 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 CCDC149Q6ZUS6 474 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 GAREM2Q75VX8 874 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 POLNQ7Z5Q5 900 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 RASGEF1CQ8N431 466 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 RNF139Q8WU17 664 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 PBKQ96KB5 322 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 CORO1BQ9BR76 489 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 IGFLR1Q9H665 355 aa15.65■□□□□ 0.1
SREK1-209ENST00000520953 COMMD8Q9NX08 183 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms