RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MAMSTRQ6ZN01 415 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 SCUBE3Q8IX30 993 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 ARL14EPQ8N8R7 260 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-222ENST00000520948 CLEC4CQ8WTT0 213 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 LRRC3BQ96PB8 259 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 DNAJC7Q99615 494 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 PDCL3Q9H2J4 239 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 ST7Q9NRC1 585 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 NCOR2Q9Y618 2525 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 DCDC2BA2VCK2 349 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 PRR5-ARHGAP8B1AHC4 643 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 COCHO43405 550 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 SKILP12757 684 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 HDCP19113 662 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 SDHBP21912 280 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 SLC7A9P82251 487 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 ARHGAP8P85298 464 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 ZNF268Q14587 947 aaPredicted RBP19■□□□□ 0.63
VEGFA-222ENST00000520948 HECTD3Q5T447 861 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 HEATR6Q6AI08 1181 aaKnown RBP19■□□□□ 0.63
VEGFA-222ENST00000520948 WDR59Q6PJI9 974 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 TXNDC11Q6PKC3 985 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 ZNF571Q7Z3V5 609 aaPredicted RBP19■□□□□ 0.63
VEGFA-222ENST00000520948 TMC6Q7Z403 805 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 DRC7Q8IY82 874 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 SIX6OS1Q8N1H7 587 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 ARHGAP18Q8N392 663 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 CPA5Q8WXQ8 436 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 USP13Q92995 863 aaPredicted RBP19■□□□□ 0.63
VEGFA-222ENST00000520948 NOX5Q96PH1 765 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 CCSER2Q9H7U1 834 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 OBP2AQ9NY56 170 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 GTSE1Q9NYZ3 720 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 CEP83Q9Y592 693 aa19■□□□□ 0.63
VEGFA-222ENST00000520948 DYNC1LI1Q9Y6G9 523 aaKnown RBP19■□□□□ 0.63
VEGFA-222ENST00000520948 TRAV19A0A0A6YYK7 116 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 SPECC1L-ADORA2AF8WAN1 911 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 DPYSL4O14531 572 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 PRAMEF12O95522 483 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 ABL1P00519 1130 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 ERBB2P04626 1255 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 RARGP13631 454 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 TCF3P15923 654 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 HOXC13P31276 330 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 CTHP32929 405 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 YWHAGP61981 247 aaKnown RBP eCLIP18.99■□□□□ 0.63
VEGFA-222ENST00000520948 ZXDBP98169 803 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 CENPCQ03188 943 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 KLHL30Q0D2K2 578 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 LRRC32Q14392 662 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 CLEC16AQ2KHT3 1053 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 BSPRYQ5W0U4 402 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 LAIR1Q6GTX8 287 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 KLHDC10Q6PID8 442 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 SPEM1Q8N4L4 309 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 CELF5Q8N6W0 485 aaKnown RBP18.99■□□□□ 0.63
VEGFA-222ENST00000520948 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 SLC30A5Q8TAD4 765 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 MIS12Q9H081 205 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 C8orf33Q9H7E9 229 aaPredicted RBP18.99■□□□□ 0.63
VEGFA-222ENST00000520948 TRPC7Q9HCX4 862 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 TDP1Q9NUW8 608 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 C2orf42Q9NWW7 574 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 NAGPAQ9UK23 515 aa18.99■□□□□ 0.63
VEGFA-222ENST00000520948 BZW2Q9Y6E2 419 aaKnown RBP18.99■□□□□ 0.63
VEGFA-222ENST00000520948 HELZP42694 1942 aaKnown RBP18.99■□□□□ 0.63
VEGFA-222ENST00000520948 TLR5O60602 858 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 TBX18O95935 607 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 SERPING1P05155 500 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 FYNP06241 537 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 TNFAIP3P21580 790 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 MMP8P22894 467 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 AVPR1AP37288 418 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 SNX16P57768 344 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 TNK2Q07912 1038 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 PTP4A2Q12974 167 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 SIM2Q14190 667 aaPredicted RBP18.98■□□□□ 0.63
VEGFA-222ENST00000520948 PON2Q15165 354 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 NAA35Q5VZE5 725 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 BEND5Q7L4P6 421 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 ERICH1Q86X53 443 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 MSANTD3Q96H12 275 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 ZFRQ96KR1 1074 aaKnown RBP18.98■□□□□ 0.63
VEGFA-222ENST00000520948 CNTNAP3BQ96NU0 1288 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 CNTNAP3Q9BZ76 1288 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 SMG9Q9H0W8 520 aaKnown RBP18.98■□□□□ 0.63
VEGFA-222ENST00000520948 ABCC13Q9NSE7 274 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 ARHGAP26Q9UNA1 814 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 CCL26Q9Y258 94 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 RALGAPA1Q6GYQ0 2036 aa18.98■□□□□ 0.63
VEGFA-222ENST00000520948 DDX3XO00571 662 aaKnown RBP eCLIP18.97■□□□□ 0.631e-11■■■■□ 22.2
VEGFA-222ENST00000520948 SART1O43290 800 aaKnown RBP18.97■□□□□ 0.63
VEGFA-222ENST00000520948 HRO43593 1189 aa18.97■□□□□ 0.63
VEGFA-222ENST00000520948 MFAP3LO75121 409 aa18.97■□□□□ 0.63
VEGFA-222ENST00000520948 ADCY5O95622 1261 aa18.97■□□□□ 0.63
VEGFA-222ENST00000520948 LTFP02788 710 aa18.97■□□□□ 0.63
VEGFA-222ENST00000520948 RALAP11233 206 aa18.97■□□□□ 0.63
VEGFA-222ENST00000520948 ATP5C1P36542 298 aaKnown RBP18.97■□□□□ 0.63
VEGFA-222ENST00000520948 MLLT6P55198 1093 aaPredicted RBP18.97■□□□□ 0.63
VEGFA-222ENST00000520948 ADKP55263 362 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms