RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 CYP3A43Q9HB55 503 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 ATP13A1Q9HD20 1204 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 GDAP2Q9NXN4 497 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 DDX43Q9NXZ2 648 aaKnown RBP6.31□□□□□ -1.4
FAM49B-218ENST00000520887 GCNT4Q9P109 453 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 MTRRQ9UBK8 725 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 HESX1Q9UBX0 185 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 CDH9Q9ULB4 789 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 CEP83Q9Y592 693 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 MTCH2Q9Y6C9 303 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 CDY1Q9Y6F8 540 aa6.31□□□□□ -1.4
FAM49B-218ENST00000520887 MKI67P46013 3256 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 I3L4J1 428 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 MED7O43513 233 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 GREM1O60565 184 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 TACC1O75410 805 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CNPP09543 421 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 HNRNPA1P09651 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 WARSP23381 471 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 OR1D2P34982 312 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 MTHFRP42898 656 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 GUCY2FP51841 1108 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 EPHB3P54753 998 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 SNX16P57768 344 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 MYL6P60660 151 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 NAB2Q15742 525 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF124Q15973 351 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 KCNMB1Q16558 191 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ATAT1Q5SQI0 421 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 TDRD10Q5VZ19 366 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 PRSS55Q6UWB4 352 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CACNA2D4Q7Z3S7 1137 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 UNC93AQ86WB7 457 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 TMEM173Q86WV6 379 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ZC3H3Q8IXZ2 948 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 KREMEN2Q8NCW0 462 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 MSANTD4Q8NCY6 345 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 OR5B17Q8NGF7 314 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ANP32BQ92688 251 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 IQCDQ96DY2 449 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF512Q96ME7 567 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 GUCD1Q96NT3 240 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 KLHL5Q96PQ7 755 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 SPAG5Q96R06 1193 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 SYT15Q9BQS2 421 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ACBD6Q9BR61 282 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 PAAF1Q9BRP4 392 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ELOVL4Q9GZR5 314 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 PDCL3Q9H2J4 239 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CCSER2Q9H7U1 834 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 UBE2ZQ9H832 354 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CARS2Q9HA77 564 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CYP4F11Q9HBI6 524 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 ZDHHC7Q9NXF8 308 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 UXTQ9UBK9 157 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 AFF4Q9UHB7 1163 aaKnown RBP6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CD207Q9UJ71 328 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 TRIOBPQ9H2D6 2365 aa6.3□□□□□ -1.4
FAM49B-218ENST00000520887 EPOPA6NHQ4 379 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 H3BS24 57 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ZNF197O14709 1029 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 PER2O15055 1255 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 PMM2O15305 246 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 TEX28O15482 410 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CLASP2O75122 1294 aaKnown RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 OAZ2O95190 189 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CBX7O95931 251 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ASS1P00966 412 aaKnown RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 LINC00271P0C7V0 271 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 KRT5P13647 590 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CD19P15391 556 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 DESP17661 470 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 CD58P19256 250 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 KCNA5P22460 613 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 HOXA9P31269 272 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 GNL1P36915 607 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-218ENST00000520887 PDE6CP51160 858 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 BPIFB4P59827 614 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ERVFC1P60507 584 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 DLG4P78352 724 aa6.29□□□□□ -1.4
FAM49B-218ENST00000520887 ROR1Q01973 937 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms