RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 A0A1B0GVC2 190 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 TMEM233B4DJY2 109 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 hCG_1984214I3L0E3 225 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 ZNF213O14771 459 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 NDST3O95803 873 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 PRR35P0CG20 571 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 TPH1P17752 444 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 KELP23276 732 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 EPHB2P29323 1055 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 ITGA8P53708 1063 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 CERKLQ49MI3 558 aaPredicted RBP4.69□□□□□ -1.66
SQLE-204ENST00000520493 PLA1AQ53H76 456 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 MTX3Q5HYI7 312 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 FCRL6Q6DN72 434 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 ZDHHC24Q6UX98 284 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 Q6ZWC4 215 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 GATAD2AQ86YP4 633 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 ATG16L2Q8NAA4 619 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 STT3BQ8TCJ2 826 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 SOCS4Q8WXH5 440 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 USP13Q92995 863 aaPredicted RBP4.69□□□□□ -1.66
SQLE-204ENST00000520493 SKA1Q96BD8 255 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 SDCCAG3Q96C92 435 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 REPS1Q96D71 796 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 C18orf8Q96DM3 657 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 LRRC46Q96FV0 321 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 FAM227BQ96M60 508 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 KATNAL1Q9BW62 490 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 C1QTNF7Q9BXJ2 289 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 CXorf36Q9H7Y0 433 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 HELLSQ9NRZ9 838 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 TFCP2L1Q9NZI6 479 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 LRFN1Q9P244 771 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 GRHPRQ9UBQ7 328 aa4.69□□□□□ -1.66
SQLE-204ENST00000520493 HERC5Q9UII4 1024 aaKnown RBP4.69□□□□□ -1.66
SQLE-204ENST00000520493 MRPS17Q9Y2R5 130 aaKnown RBP4.69□□□□□ -1.66
SQLE-204ENST00000520493 PSMD9O00233 223 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 COQ9O75208 318 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 TJP3O95049 919 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 ITGA2BP08514 1039 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 DGKEP52429 567 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 GEMIN4P57678 1058 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 CYP4F2P78329 520 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 SP2Q02086 613 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 NSUN2Q08J23 767 aaKnown RBP eCLIP4.68□□□□□ -1.66
SQLE-204ENST00000520493 DDX10Q13206 875 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 SLC4A8Q2Y0W8 1093 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 ZNF750Q32MQ0 723 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 FBXO47Q5MNV8 452 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 HYIQ5T013 277 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 INTS11Q5TA45 600 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 GGT6Q6P531 493 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 RINLQ6ZS11 566 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 SPARTQ8N0X7 666 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 CLASRPQ8N2M8 674 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 PNLDC1Q8NA58 520 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 SPPL3Q8TCT6 385 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 OTUD7AQ8TE49 926 aaPredicted RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 ZDHHC12Q96GR4 267 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 ZSCAN31Q96LW9 406 aaPredicted RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 PPM1MQ96MI6 270 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.68□□□□□ -1.66
SQLE-204ENST00000520493 TMOD4Q9NZQ9 345 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 IGSF9Q9P2J2 1179 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 DNMT3BQ9UBC3 853 aaKnown RBP4.68□□□□□ -1.66
SQLE-204ENST00000520493 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.68□□□□□ -1.66
SQLE-204ENST00000520493 DTNAQ9Y4J8 743 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 CDY1Q9Y6F8 540 aa4.68□□□□□ -1.66
SQLE-204ENST00000520493 UBE2Q2LH0YL09 131 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 H7C1Q1 480 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 RAB27BO00194 218 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 PPP6CO00743 305 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 NCAM2O15394 837 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 EPB41L2O43491 1005 aaKnown RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 FAM155BO75949 473 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 NTSR2O95665 410 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 TUBB4AP04350 444 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 CYP2D6P10635 497 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 NPPBP16860 134 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 MAPK9P45984 424 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 IRX6P78412 446 aaPredicted RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 POSTNQ15063 836 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 CERCAMQ5T4B2 595 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 L1TD1Q5T7N2 865 aaKnown RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 FAXCQ5TGI0 409 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 RRAGBQ5VZM2 374 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 KRBA2Q6ZNG9 492 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 CAND1Q86VP6 1230 aaKnown RBP4.67□□□□□ -1.66
SQLE-204ENST00000520493 ZNF280BQ86YH2 543 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 ABRAQ8N0Z2 381 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 NAXEQ8NCW5 288 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 BPIFB1Q8TDL5 484 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 SCARB1Q8WTV0 552 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 RAPGEF4Q8WZA2 1011 aa4.67□□□□□ -1.66
SQLE-204ENST00000520493 UBXN10Q96LJ8 280 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms