RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ARID5AQ03989 594 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 DEFB119Q8N690 84 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 EDEM1Q92611 657 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 RAD54BQ9Y620 910 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 USP3Q9Y6I4 520 aa16.92■□□□□ 0.3
IGHV3-42-201ENST00000520410 RALGAPA1Q6GYQ0 2036 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 BCLAF3A2AJT9 711 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 KHNYNO15037 678 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 GADD45BO75293 160 aaPredicted RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 PAK1Q13153 545 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 KIAA1324Q6UXG2 1013 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 ZC3H3Q8IXZ2 948 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 FRMD1Q8N878 549 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 DDI1Q8WTU0 396 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 DDX1Q92499 740 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 ACOX2Q99424 681 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 FAM124BQ9H5Z6 455 aaPredicted RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 OLA1Q9NTK5 396 aaKnown RBP16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 CACNA2D2Q9NY47 1150 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 MARK1Q9P0L2 795 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 COQ4Q9Y3A0 265 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 EML5Q05BV3 1969 aa16.91■□□□□ 0.3
IGHV3-42-201ENST00000520410 GREM1O60565 184 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 TSPAN3O60637 253 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 SETSIPP0DME0 302 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 KRT5P13647 590 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 P2RY2P41231 377 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 HARS2P49590 506 aaKnown RBP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 RPL6Q02878 288 aaKnown RBP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 STARD3Q14849 445 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 PLA2G2CQ5R387 149 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 Q6ZNB5 142 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 RRAGAQ7L523 313 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 FMNL3Q8IVF7 1028 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 UCMAQ8WVF2 138 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 DUSP9Q99956 384 aaKnown RBP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 UBXN6Q9BZV1 441 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 CIPCQ9C0C6 399 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 SFMBT1Q9UHJ3 866 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 AGO1Q9UL18 857 aaKnown RBP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 CYP8B1Q9UNU6 501 aa16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.9■□□□□ 0.3
IGHV3-42-201ENST00000520410 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 PATE3B3GLJ2 98 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 PRRT4C9JH25 899 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 CALCAP01258 141 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 GABRG2P18507 467 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 UAP1L1Q3KQV9 507 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 LYSMD4Q5XG99 296 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 KAT5Q92993 513 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 PLD4Q96BZ4 506 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 MYOFQ9NZM1 2061 aa16.89■□□□□ 0.29
IGHV3-42-201ENST00000520410 SPTBN4Q9H254 2564 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 C4orf47A7E2U8 309 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 O00370 1275 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 AP5Z1O43299 807 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 MSI1O43347 362 aaKnown RBP16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 GNA14O95837 355 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 KLKB1P03952 638 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 CFIP05156 583 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 PAEPP09466 180 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 MORC3Q14149 939 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 CAMK4Q16566 473 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 TRIM61Q5EBN2 209 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 DAB2IPQ5VWQ8 1189 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 BSPRYQ5W0U4 402 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 TTI2Q6NXR4 508 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 ANKS1BQ7Z6G8 1248 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 CACUL1Q86Y37 369 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 ARHGEF19Q8IW93 802 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 OLIG1Q8TAK6 271 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 NUSAP1Q9BXS6 441 aaKnown RBP16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 MIS12Q9H081 205 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 SLC6A17Q9H1V8 727 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 ST7Q9NRC1 585 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 KIAA1257Q9ULG3 409 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 ZNF292O60281 2723 aa16.88■□□□□ 0.29
IGHV3-42-201ENST00000520410 YJEFN3A6XGL0 299 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 E7ENQ6 273 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 SYNCRIPO60506 623 aaKnown RBP16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 NDUFS2O75306 463 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 NDUFV2P19404 249 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 PTGER3P43115 390 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 MAPK8P45983 427 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 LIMK1P53667 647 aa16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 ATXN3P54252 364 aaPredicted RBP16.87■□□□□ 0.29
IGHV3-42-201ENST00000520410 KCNH2Q12809 1159 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms